y
Basic Information | |
---|---|
Species | Oryza sativa |
Cazyme ID | LOC_Os09g36190.2 |
Family | GT8 |
Protein Properties | Length: 696 Molecular Weight: 78853.7 Isoelectric Point: 9.2654 |
Chromosome | Chromosome/Scaffold: 9 Start: 20862473 End: 20866761 |
Description | galacturonosyltransferase 1 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT8 | 353 | 668 | 0 |
CLSMRLTIDYYLLPLEKRKFPRSENLENPELYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWL NSSYCPVLRQLESAAMKEYYFKADRPTTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWDVDLNGKVNGAVETCGESF HRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQSMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDN AAVVHYNGNMKPWLEL |
Full Sequence |
---|
Protein Sequence Length: 696 Download |
MANSKRLPYS TAGGGGGGGG GGGRRGGASG SGVVAPLVVL VFLFVLAPSI FFVARNGGHV 60 HVASDPKDRE GNQETDWQKQ LATNNLKSIL SKEMIDALAS SQQEAGTLSV DFFRKRASPS 120 WKTDDLVNDL SNASLDVDDK VKSENSSAEH ELSLTDKTPK DDTAEHQVDA PAKNARRKLR 180 EKRREKRAMD LVRKDDEARV KLENAAIERS KAVDSAVLGK YSIWRKENEN ENSDSTVRLM 240 RDQIIMARVY SVLAKSKNKN DLYQELQTRI KESQRAVGEA TADSDLHHSA PEKVRVMGQL 300 LSKAREDVYD CKAVTQRLRA MLQSADEQVR SLKKQSTFLS QLAAKTIPNS IHCLSMRLTI 360 DYYLLPLEKR KFPRSENLEN PELYHYALFS DNVLAASVVV NSTIMNAKEP EKHVFHLVTD 420 KLNFGAMNMW FLLNPPGKAT IHVENVDEFK WLNSSYCPVL RQLESAAMKE YYFKADRPTT 480 LSAGSSNLKY RNPKYLSMLN HLRFYLPQVY PKLDKILFLD DDIVVQKDLT GLWDVDLNGK 540 VNGAVETCGE SFHRFDKYLN FSNPHIARNF DPNACGWAYG MNIFDLKEWK KKDITGIYHK 600 WQSMNEDRVL WKLGTLPPGL LTFYKLTHPL DKSWHVLGLG YNPSIDRSEI DNAAVVHYNG 660 NMKPWLELAM TKYRPYWTRY IKYDHPYIRG CNLAE* 720 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02910 | PLN02910 | 0 | 118 | 695 | 586 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 194 | 693 | 504 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 232 | 693 | 467 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 0 | 238 | 694 | 466 | + galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 233 | 695 | 466 | + Probable galacturonosyltransferase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005794 | Golgi apparatus |
GO:0005975 | carbohydrate metabolic process |
GO:0009058 | biosynthetic process |
GO:0009987 | cellular process |
GO:0016740 | transferase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI38820.1 | 0 | 64 | 695 | 50 | 681 | unnamed protein product [Vitis vinifera] |
GenBank | EEC84934.1 | 0 | 1 | 695 | 1 | 695 | hypothetical protein OsI_32147 [Oryza sativa Indica Group] |
GenBank | EEE70101.1 | 0 | 1 | 673 | 1 | 632 | hypothetical protein OsJ_30109 [Oryza sativa Japonica Group] |
RefSeq | NP_001063757.1 | 0 | 1 | 695 | 1 | 695 | Os09g0531900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002462717.1 | 0 | 55 | 695 | 51 | 683 | hypothetical protein SORBIDRAFT_02g030820 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.00001 | 492 | 665 | 75 | 252 | A Chain A, Crystal Structure Of A Methyltransferase-Like Protein (Spo2022) From Silicibacter Pomeroyi Dss-3 At 1.80 A Resolution |
PDB | 1g9r_A | 0.00001 | 492 | 665 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.0001 | 492 | 665 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |