y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra006301 |
Family | GT8 |
Protein Properties | Length: 534 Molecular Weight: 61027.1 Isoelectric Point: 8.5432 |
Chromosome | Chromosome/Scaffold: 03 Start: 2921616 End: 2924174 |
Description | galacturonosyltransferase 14 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 174 | 505 | 0 |
CLSLRLTDEYSSNAHARRQLPSPEFLPVLSDNAYHHYILATDNILAASVVVSSAVHSSSKPEKIVFHIITDKKTYAGMHSWFALNSVAPAIVEVKGVHQF DWLTRENVPVLEAVESHNGVRNYYHGNHVAGANLTETTPRRFASKLQSRSPKYISLLNHLRIYIPELFPNLDKVVFLDDDIVVQRDLAPLWDIDLGGKVN GAVETCRGDDEWVMSKRLRNYFNFSHPLIAKHLDPEECAWAYGMNVFDLQAWRKTSIRETYHSWLRENLKSNLTMWKLGTLPPALIAFKGHVHILDPSWH MLGLGYQKNTNIENVRKAAVIHYNGQSKPWLE |
Full Sequence |
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Protein Sequence Length: 534 Download |
MQLHVSPSMR SITISSSNDF TTDLMKIKLA ARHISSRTLF HTILILAFLL PFVFILTALV 60 PLEGVNKCSS IDCLGRRLGP RFLGRVDDSE RLARDFYNIL NEVSTQDIPD GLKLPDSFNH 120 LLSDMKNNHY DAKTFALVLR AMMEKFERDI RESKFAELMN KHFAASSIPK GIHCLSLRLT 180 DEYSSNAHAR RQLPSPEFLP VLSDNAYHHY ILATDNILAA SVVVSSAVHS SSKPEKIVFH 240 IITDKKTYAG MHSWFALNSV APAIVEVKGV HQFDWLTREN VPVLEAVESH NGVRNYYHGN 300 HVAGANLTET TPRRFASKLQ SRSPKYISLL NHLRIYIPEL FPNLDKVVFL DDDIVVQRDL 360 APLWDIDLGG KVNGAVETCR GDDEWVMSKR LRNYFNFSHP LIAKHLDPEE CAWAYGMNVF 420 DLQAWRKTSI RETYHSWLRE NLKSNLTMWK LGTLPPALIA FKGHVHILDP SWHMLGLGYQ 480 KNTNIENVRK AAVIHYNGQS KPWLEIGFEH LRPFWTKYVN YSNDFIKNCH ILE* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 3.0e-130 | 121 | 531 | 411 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 8.0e-133 | 121 | 531 | 418 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 2.0e-178 | 29 | 532 | 508 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 0 | 1 | 533 | 533 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 0 | 1 | 531 | 532 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAC01746.1 | 0 | 1 | 533 | 44 | 572 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_001118545.1 | 0 | 1 | 533 | 1 | 532 | GAUT13 (Galacturonosyltransferase 13); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | NP_186753.2 | 0 | 1 | 533 | 1 | 533 | GAUT13 (Galacturonosyltransferase 13); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | NP_197051.2 | 0 | 1 | 533 | 1 | 532 | GAUT14 (Galacturonosyltransferase 14); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002284273.1 | 0 | 1 | 533 | 1 | 533 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.0000003 | 325 | 503 | 77 | 252 | A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) |
PDB | 1g9r_A | 0.0000003 | 325 | 503 | 77 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.0000003 | 325 | 503 | 77 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |