y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00065232m |
Family | GT8 |
Protein Properties | Length: 547 Molecular Weight: 62927.8 Isoelectric Point: 7.9288 |
Chromosome | Chromosome/Scaffold: 012310 Start: 4281 End: 9354 |
Description | galacturonosyltransferase 11 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 206 | 520 | 0 |
CLTVKLTEEWLRNPKHRSRSEEQQNSTRSVDNNLYHFCIFSDNVLATSVVVNSTVSNANHPQQLVFHVVTDRIHFGAMSTWFLINDFKGCTVEVRCIDEF SWLNASSSPLVRQLSEVETQGYYHSAGSKNPEREIKFHNPKFVSLLNHLRFYIPQILPNLEKVVFLDDDVVVQKDLTQLFSIELHGNVIGAVETCLESFH RYHKYLNFSHPTISSKIDPHTCGWAFGMNIFDLIAWRKANTTSLYHYWQEQNSDLLLWRTGTLPAGLLTFYGLMEPLDRRWHVLGLGYDVDIDDRLIESA AVVHYNGNMKPWLKL |
Full Sequence |
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Protein Sequence Length: 547 Download |
MLRGTGHGGG DARRRALEHR RSARRRLPGW IWWLLGIFLL VGLMLFVLHH NQKEQFRPPV 60 VDNGSEIEEV PHEKVNFTEE LLSSTSFARQ LADQMTLAKA YVILTKEHGN LQLAWELSSQ 120 IRNCQRLLSE GAVSGRAITR DDAHPIISRF ARLIYKAQDA HYDISTTIVT LKSHALALEE 180 RAKAAIVQSA EFGQLAAESF PKSLHCLTVK LTEEWLRNPK HRSRSEEQQN STRSVDNNLY 240 HFCIFSDNVL ATSVVVNSTV SNANHPQQLV FHVVTDRIHF GAMSTWFLIN DFKGCTVEVR 300 CIDEFSWLNA SSSPLVRQLS EVETQGYYHS AGSKNPEREI KFHNPKFVSL LNHLRFYIPQ 360 ILPNLEKVVF LDDDVVVQKD LTQLFSIELH GNVIGAVETC LESFHRYHKY LNFSHPTISS 420 KIDPHTCGWA FGMNIFDLIA WRKANTTSLY HYWQEQNSDL LLWRTGTLPA GLLTFYGLME 480 PLDRRWHVLG LGYDVDIDDR LIESAAVVHY NGNMKPWLKL AIRRYKYIWE RYVNFSHPNV 540 RECMLH* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02718 | PLN02718 | 1.0e-119 | 51 | 546 | 501 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 4.0e-144 | 89 | 543 | 478 | + galacturonosyltransferase | ||
PLN02910 | PLN02910 | 9.0e-147 | 83 | 543 | 475 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 5.0e-156 | 89 | 543 | 457 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 49 | 546 | 498 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE59250.1 | 0 | 62 | 546 | 94 | 577 | hypothetical protein OsJ_11255 [Oryza sativa Japonica Group] |
RefSeq | NP_001050360.1 | 0 | 51 | 546 | 47 | 541 | Os03g0413400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147871.1 | 0 | 1 | 546 | 1 | 543 | transferase, transferring glycosyl groups [Zea mays] |
RefSeq | NP_001151784.1 | 0 | 1 | 546 | 1 | 543 | LOC100285419 [Zea mays] |
RefSeq | XP_002465134.1 | 0 | 1 | 546 | 1 | 543 | hypothetical protein SORBIDRAFT_01g032570 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.000002 | 335 | 517 | 65 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.000005 | 335 | 517 | 65 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.000005 | 335 | 517 | 65 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |