y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10025075m |
Family | GT8 |
Protein Properties | Length: 610 Molecular Weight: 69783 Isoelectric Point: 8.6644 |
Chromosome | Chromosome/Scaffold: 4 Start: 7725384 End: 7728720 |
Description | los glycosyltransferase 5 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 291 | 581 | 0 |
CLSMRLTTEYFTLDHEKRQLFQQSYNNPDLYHYVVFSDNVLACAVVVNSTISSSKEPGKIVFHVVTDSLNYPAISMWFLLNPSKASIQILNIDEMSVLPL DHAELLMKQNSSDPRIISGLNHARFYLPDIFPGLNKIVLFDHDVVVQSDLSRLWSLDMKGKVIGAVETCLEGEPSFQSMEKLINFSDAWVAQKFDPKACT WAFGMNLFDLEEWRRQDLTSVYLKYFELGVKRHLWKAGSLPIGWLTFFGQTYPLEKRWNMVGLGHESGVRASDIEKAAVIHYDGIMKPWLD |
Full Sequence |
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Protein Sequence Length: 610 Download |
MNQVRRWQRI FILSLLLLSV LTPIVFVYRL KSITSVDKGE FIEELSDITD KTDDDLRLTA 60 VEQDGEVLEE PKRILQDREF NSVVSSSSAD KSNDTMQSNE GDKTTLLSEI DGGNNHKTKE 120 EQALVAQKTT ISSNAEVKLP ARDIQRNRKP EFRPPSGKSE KIKRVQPERA TDERVKEIRD 180 KIIQARAYLN LALPGNNSQI VKELRVRTKE LERAIGDVTK DKHLPKSSPN RLKAMEAALY 240 KVSRAFHNCP AIAIKLQAMT YKTEEQARAQ KKHAAYLMQL AARTTPKGLH CLSMRLTTEY 300 FTLDHEKRQL FQQSYNNPDL YHYVVFSDNV LACAVVVNST ISSSKEPGKI VFHVVTDSLN 360 YPAISMWFLL NPSKASIQIL NIDEMSVLPL DHAELLMKQN SSDPRIISGL NHARFYLPDI 420 FPGLNKIVLF DHDVVVQSDL SRLWSLDMKG KVIGAVETCL EGEPSFQSME KLINFSDAWV 480 AQKFDPKACT WAFGMNLFDL EEWRRQDLTS VYLKYFELGV KRHLWKAGSL PIGWLTFFGQ 540 TYPLEKRWNM VGLGHESGVR ASDIEKAAVI HYDGIMKPWL DIGIDKYKRY WNIHVPYNHP 600 YLQRCNIHD* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02769 | PLN02769 | 7.0e-123 | 172 | 608 | 460 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 1.0e-135 | 144 | 608 | 502 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 4.0e-149 | 171 | 607 | 464 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 1 | 609 | 614 | + Probable galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 32 | 607 | 615 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_563771.1 | 0 | 1 | 608 | 1 | 588 | GAUT6 (Galacturonosyltransferase 6); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | NP_850150.1 | 0 | 1 | 609 | 1 | 610 | LGT5 (LOS GLYCOSYLTRANSFERASE 5); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002282102.1 | 0 | 1 | 609 | 1 | 588 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002307628.1 | 0 | 1 | 609 | 1 | 605 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
RefSeq | XP_002520989.1 | 0 | 4 | 608 | 9 | 632 | Glycosyltransferase QUASIMODO1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.0002 | 324 | 579 | 3 | 252 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1g9r_A | 0.0002 | 324 | 579 | 3 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.0008 | 324 | 579 | 3 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |