y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.014G073800.5 |
Family | GT8 |
Protein Properties | Length: 521 Molecular Weight: 60304.4 Isoelectric Point: 9.6982 |
Chromosome | Chromosome/Scaffold: 14 Start: 5948796 End: 5951648 |
Description | galacturonosyltransferase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 178 | 493 | 0 |
CLSMRLTIDYYLLPLEKRKFPRSEDLENPNLYHYALFSDNVLAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWL NSSYCPVLRQLESAAMKEYYFKANHPTSLSSGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTKLWSVDLNGKVNGAVETCGESF HRFDKYLNFSNPHIARHFDPNSCGWAYGMNIFDLKVWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLITFYNLTHPLQKSWHVLGLGYNPSIDRSEIEN AAVVHYNGNMKPWLEL |
Full Sequence |
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Protein Sequence Length: 521 Download |
MQQLREKRRE KRVAELLRQD DEATARLENA AIERSKLVDG AVLGKYSIWR KEMDNENSDS 60 TVRLMRDQMI MARVYLSIAK MKNKRDLLQE LQTRLKESQR ALGESSADSD LHPSAPGKLK 120 AMGQVLSKAR EQLYDCKLVT GKLRAMLQTA DEQVRSLKKQ STFLSQLAAK TVPNGIHCLS 180 MRLTIDYYLL PLEKRKFPRS EDLENPNLYH YALFSDNVLA ASVVVNSTIM NAKDSSKHVF 240 HLVTDKLNFG AMNMWFLLNP PGKATIHVEN VDEFKWLNSS YCPVLRQLES AAMKEYYFKA 300 NHPTSLSSGS SNLKYRNPKY LSMLNHLRFY LPQVYPKLDK ILFLDDDIVV QKDLTKLWSV 360 DLNGKVNGAV ETCGESFHRF DKYLNFSNPH IARHFDPNSC GWAYGMNIFD LKVWKKKDIT 420 GIYHKWQNMN EDRVLWKLGT LPPGLITFYN LTHPLQKSWH VLGLGYNPSI DRSEIENAAV 480 VHYNGNMKPW LELAMTKYRP YWTKYIKYDH PYLRNCNLSE * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02910 | PLN02910 | 0 | 2 | 520 | 519 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 19 | 518 | 504 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 57 | 519 | 472 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 0 | 59 | 517 | 479 | + galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 58 | 520 | 466 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC84934.1 | 0 | 15 | 520 | 190 | 695 | hypothetical protein OsI_32147 [Oryza sativa Indica Group] |
RefSeq | NP_001063757.1 | 0 | 15 | 520 | 190 | 695 | Os09g0531900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002302550.1 | 0 | 1 | 520 | 125 | 644 | glycosyltransferase [Populus trichocarpa] |
RefSeq | XP_002320745.1 | 0 | 2 | 520 | 169 | 687 | glycosyltransferase [Populus trichocarpa] |
RefSeq | XP_002511763.1 | 0 | 2 | 520 | 192 | 710 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.00005 | 299 | 490 | 45 | 252 | A Chain A, Crystal Structure Analysis Of Clpb |
PDB | 1g9r_A | 0.00005 | 299 | 490 | 45 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.0001 | 299 | 490 | 45 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO842648 | 328 | 194 | 521 | 0 |
HO795725 | 457 | 63 | 519 | 0 |
DT733722 | 303 | 202 | 504 | 0 |
GT042159 | 323 | 197 | 519 | 0 |
EX355441 | 298 | 153 | 450 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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