y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.011G132600.1 |
Family | GT8 |
Protein Properties | Length: 533 Molecular Weight: 60666.3 Isoelectric Point: 9.3389 |
Chromosome | Chromosome/Scaffold: 11 Start: 15737462 End: 15741026 |
Description | galacturonosyltransferase 12 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 173 | 505 | 0 |
CLALRLAHEHSTNAAARRQLPLPELVPALVDNSYFHFVLASDNVLAASVVANSLFQNALRPEKFVLHIITDRKTYSPMQAWFSLHPLSPAIIEVKALHHF DWFAKGKVPVLEAMEKDLRVRSRFRGGSSAIVESNTDKPHIIAAKLQTLGPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVN GAVETCRGQDKFVMSKRLKNYLNFSHPLIAKNFNPNECAWAYGMNIFDLEAWRKTNISITYHHWVEENLKSGLSLWQLGTLPPGLIAFHGHVHVIDPFWH MLGLGYQENTSLADAETAGVIHFNGRAKPWLDI |
Full Sequence |
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Protein Sequence Length: 533 Download |
MQLHISPSLR HVTVLPGNGV REFIKVKVRA RRVSYRMLFY SLLFFTFLLR FVFLLSTADT 60 IDAETKCSTL GCLGKRLGPR ILGRRLDSAV PEVMYQVLEQ PLDNDELKGR DDIPQTLEEF 120 MDEVKNSIFD AKAFALKLRE MVTLLEQRTR NAKIQEYLYR HVASSSIPKQ LLCLALRLAH 180 EHSTNAAARR QLPLPELVPA LVDNSYFHFV LASDNVLAAS VVANSLFQNA LRPEKFVLHI 240 ITDRKTYSPM QAWFSLHPLS PAIIEVKALH HFDWFAKGKV PVLEAMEKDL RVRSRFRGGS 300 SAIVESNTDK PHIIAAKLQT LGPKYNSVMN HIRIHLPELF PSLNKVVFLD DDIVVQTDLS 360 PLWDIDMNGK VNGAVETCRG QDKFVMSKRL KNYLNFSHPL IAKNFNPNEC AWAYGMNIFD 420 LEAWRKTNIS ITYHHWVEEN LKSGLSLWQL GTLPPGLIAF HGHVHVIDPF WHMLGLGYQE 480 NTSLADAETA GVIHFNGRAK PWLDIAFPQL RPLWAKYINS SDKFITGCHI RT* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02523 | PLN02523 | 1.0e-126 | 116 | 528 | 426 | + galacturonosyltransferase | ||
PLN02742 | PLN02742 | 3.0e-128 | 129 | 531 | 403 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 4.0e-161 | 61 | 530 | 473 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 0 | 1 | 532 | 533 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 0 | 1 | 530 | 531 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABP65660.1 | 0 | 1 | 531 | 1 | 531 | secondary wall-associated glycosyltransferase family 8D [Populus tremula x Populus alba] |
EMBL | CBI20502.1 | 0 | 1 | 532 | 1 | 532 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282637.1 | 0 | 1 | 532 | 1 | 533 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002317564.1 | 0 | 1 | 532 | 1 | 532 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
RefSeq | XP_002319802.1 | 0 | 1 | 531 | 1 | 531 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.00009 | 292 | 439 | 48 | 179 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 1g9r_A | 0.00009 | 292 | 439 | 48 | 179 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.0001 | 292 | 439 | 48 | 179 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |