y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra016552 |
Family | GT8 |
Protein Properties | Length: 528 Molecular Weight: 60546.4 Isoelectric Point: 8.9732 |
Chromosome | Chromosome/Scaffold: 08 Start: 19016716 End: 19018820 |
Description | galacturonosyltransferase 11 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 191 | 500 | 0 |
CLMIKLTSDWLTERREVADESRNSPRLVDNNLYHFCIFTDNVIAASVAVNSTVANADHPKQLVFHVVTNRVSYKAMQAWFLGNDFKGAAIEIRSVEEFSW LNASYSPVVKQLLDKDSRAYYFGDQETNSEPKVRNPKYLSLLNHLRFYIPEIYPQLEKIVFLDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYK YLNFSDPLISSKFDPQACGWAFGMNVFDLIAWRKANVTGRYHYWQEKNRERTLWKLGTLPPGLLAFYGLTEPLDRRWHVLGLGYDVNIDNRLIETAAVIH YNGNMKPWLK |
Full Sequence |
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Protein Sequence Length: 528 Download |
MRRRRVARRR LLSWIWLLLG SFSVAGLVLF MVQHRHQQQD PSQLNLERDT RTDNVSPPRL 60 NFTEEVTSAS SFARQLAEQM TLAKAYVFIA KEHNNLHLAW ELSSKIRTCQ LLLSKAAMRG 120 QPISLDEAKP IVTGLSSLIY KAQDAHYDIA TSMMTMKSHI QALEERANAA TVQTTVFGQS 180 VAEAVPKSLH CLMIKLTSDW LTERREVADE SRNSPRLVDN NLYHFCIFTD NVIAASVAVN 240 STVANADHPK QLVFHVVTNR VSYKAMQAWF LGNDFKGAAI EIRSVEEFSW LNASYSPVVK 300 QLLDKDSRAY YFGDQETNSE PKVRNPKYLS LLNHLRFYIP EIYPQLEKIV FLDDDVVVQK 360 DLTPLFSLDL HGNVNGAVET CLEAFHRYYK YLNFSDPLIS SKFDPQACGW AFGMNVFDLI 420 AWRKANVTGR YHYWQEKNRE RTLWKLGTLP PGLLAFYGLT EPLDRRWHVL GLGYDVNIDN 480 RLIETAAVIH YNGNMKPWLK IGIGRYKPFW FKFLNSSHPY LQDCVTA* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02718 | PLN02718 | 9.0e-124 | 32 | 524 | 512 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 1.0e-151 | 74 | 524 | 477 | + galacturonosyltransferase | ||
PLN02910 | PLN02910 | 2.0e-157 | 65 | 524 | 468 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 1.0e-171 | 33 | 524 | 498 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 20 | 526 | 511 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_564057.4 | 0 | 34 | 527 | 39 | 537 | GAUT11 (Galacturonosyltransferase 11); polygalacturonate 4-alpha-galacturonosyltransferase [Arabidopsis thaliana] |
RefSeq | XP_002262858.1 | 0 | 34 | 527 | 39 | 535 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318580.1 | 0 | 29 | 527 | 1 | 489 | glycosyltransferase [Populus trichocarpa] |
RefSeq | XP_002330135.1 | 0 | 60 | 527 | 61 | 531 | glycosyltransferase [Populus trichocarpa] |
RefSeq | XP_002514619.1 | 0 | 34 | 527 | 39 | 535 | Glycosyltransferase QUASIMODO1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.0006 | 325 | 498 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.001 | 325 | 498 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.001 | 325 | 498 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |