y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.014G142000.2 |
Family | GT8 |
Protein Properties | Length: 389 Molecular Weight: 44600.3 Isoelectric Point: 7.4183 |
Chromosome | Chromosome/Scaffold: 14 Start: 10813366 End: 10822028 |
Description | galacturonosyltransferase 15 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 30 | 360 | 0 |
CLCLKLAEEYAVNAMARSHLPPPEYVSRLTDPSFHHVVLLTDNVLAASVVISSTVQHSANPEKLVFHIVTDKKTYIPMNAWFAINPIKSAAVEVKGLHQY DWSHEVNVHVKEMLEIHRLIWSHYNDNLRNANFQHEGVNRRSLEALTPSCLSLLNHLRIYIPELFPDLNKIVFLDEDVVVQHDMSSLWELDLNKKVVGAV VDSWCGDNCCPGKKYKDYLNFSYPIISSNFDHDRCVWLYGVNVFDLEAWRRVKITTNYHKWLKHNLNFGMELWQPGVHPPALLAFEGQVHPIDPSWHVGG LGYRPPQAHNIKMLGDAAVLHFSGPAKPWLD |
Full Sequence |
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Protein Sequence Length: 389 Download |
MMELKVQSAR EQESINWHLA SHGVPKSLHC LCLKLAEEYA VNAMARSHLP PPEYVSRLTD 60 PSFHHVVLLT DNVLAASVVI SSTVQHSANP EKLVFHIVTD KKTYIPMNAW FAINPIKSAA 120 VEVKGLHQYD WSHEVNVHVK EMLEIHRLIW SHYNDNLRNA NFQHEGVNRR SLEALTPSCL 180 SLLNHLRIYI PELFPDLNKI VFLDEDVVVQ HDMSSLWELD LNKKVVGAVV DSWCGDNCCP 240 GKKYKDYLNF SYPIISSNFD HDRCVWLYGV NVFDLEAWRR VKITTNYHKW LKHNLNFGME 300 LWQPGVHPPA LLAFEGQVHP IDPSWHVGGL GYRPPQAHNI KMLGDAAVLH FSGPAKPWLD 360 IGFPELRSLW NRHVNFSDKF IRKCRILG* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 4.0e-108 | 19 | 386 | 368 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 1.0e-111 | 2 | 384 | 389 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 5.0e-140 | 1 | 386 | 389 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 2.0e-156 | 2 | 387 | 389 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 0 | 1 | 388 | 388 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB88296.1 | 0 | 1 | 387 | 150 | 536 | putative protein [Arabidopsis thaliana] |
EMBL | CAN67083.1 | 0 | 2 | 365 | 143 | 505 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002279893.1 | 0 | 2 | 388 | 143 | 528 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002321071.1 | 0 | 1 | 388 | 144 | 531 | glycosyltransferase [Populus trichocarpa] |
RefSeq | XP_002520380.1 | 0 | 2 | 388 | 150 | 535 | Glycosyltransferase QUASIMODO1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.00001 | 180 | 358 | 79 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.00004 | 180 | 358 | 79 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.00004 | 180 | 358 | 79 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT491778 | 277 | 1 | 245 | 0 |
DV702265 | 289 | 2 | 290 | 0 |
JZ151417 | 298 | 33 | 330 | 0 |
CO127225 | 289 | 99 | 387 | 0 |
DV130541 | 258 | 11 | 267 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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