y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra015529 |
Family | GT8 |
Protein Properties | Length: 602 Molecular Weight: 69169.2 Isoelectric Point: 9.5029 |
Chromosome | Chromosome/Scaffold: 10 Start: 1212299 End: 1215350 |
Description | galacturonosyltransferase 6 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 281 | 573 | 0 |
CLSMRLTSEYFALDPEKRQMSNQEKFNDPSLNHYVVFSDNVLASAVVANSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLNIQSAAAIQIQNIDDMDVL PLDYDQLLMKQNSNDPRFISTLNHARFYLPDIFPGLNKMVLFDHDVVVQRDLSRLWSIDMKGKVVGAVETCKEGEPSFHSMSTFINFSDAWVSGKFSPKT CTWAFGMNLVDLEEWRRRKLTSTYIKYFNMGTKRPLWKAGSLPIGWLTFYRQTIPLDKRWHVMGLGRESGIKTVDIEQAAVIHYDGIMKPWLD |
Full Sequence |
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Protein Sequence Length: 602 Download |
MNQIRRWQRI LFLSLLSISV LAPLVFVSNR LKTITPVGRR EFIEELSNFR YRTSDLRLNA 60 VEHEDGEGLK GPRLILYKDG EEFNSSVSDD KEKTIDLPNI DDGNNHKYSE EKVVDSQLTK 120 LVSDSKDHNL LVNQLGNKTE FKPPLSKGEK NTKVHQSDRA TDMKIKEIRD KIIQAKAYLN 180 YAPPGSNSQI VKELRTRMRE LERAVGDVTK DKDVSKGALR KLKPLEATLY KASRVFNNCP 240 VIATKLRAMN YNTEELVQAQ KNQASYLMHL AARTTPKGQH CLSMRLTSEY FALDPEKRQM 300 SNQEKFNDPS LNHYVVFSDN VLASAVVANS TISSSKEPEK IVFHVVTDSL NYPAISMWFL 360 LNIQSAAAIQ IQNIDDMDVL PLDYDQLLMK QNSNDPRFIS TLNHARFYLP DIFPGLNKMV 420 LFDHDVVVQR DLSRLWSIDM KGKVVGAVET CKEGEPSFHS MSTFINFSDA WVSGKFSPKT 480 CTWAFGMNLV DLEEWRRRKL TSTYIKYFNM GTKRPLWKAG SLPIGWLTFY RQTIPLDKRW 540 HVMGLGRESG IKTVDIEQAA VIHYDGIMKP WLDIGIDKYK RYWNRHVPFY HSYLQQCNIH 600 A* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02769 | PLN02769 | 2.0e-118 | 162 | 600 | 461 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 1.0e-129 | 130 | 600 | 509 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 2.0e-144 | 161 | 599 | 464 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 4.0e-180 | 22 | 599 | 626 | + Probable galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 1 | 601 | 606 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_563771.1 | 0 | 1 | 601 | 1 | 589 | GAUT6 (Galacturonosyltransferase 6); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | NP_850150.1 | 0 | 1 | 600 | 1 | 609 | LGT5 (LOS GLYCOSYLTRANSFERASE 5); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002282102.1 | 0 | 1 | 600 | 1 | 587 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002307628.1 | 0 | 1 | 600 | 1 | 604 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
RefSeq | XP_002520989.1 | 0 | 4 | 601 | 9 | 633 | Glycosyltransferase QUASIMODO1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.00004 | 315 | 571 | 3 | 252 | A Chain A, Crystal Structure Of Longer Splice Variant Of Ptd012 From Homo Sapiens Reveals A Novel Zinc-Containing Fold |
PDB | 1g9r_A | 0.00004 | 315 | 571 | 3 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.0005 | 315 | 500 | 3 | 169 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |