y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb05g022970.1 |
Family | GT8 |
Protein Properties | Length: 544 Molecular Weight: 61083.1 Isoelectric Point: 9.0405 |
Chromosome | Chromosome/Scaffold: 5 Start: 55310405 End: 55313370 |
Description | galacturonosyltransferase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 224 | 516 | 0 |
CLAMQLTAEYFSLDPSKREFPKRESIQLDGYYHYAIFSDNVLASAVVVNSTIAASKDPGRIILHIVTDALNYPAMMMWFLRNPPTPAAIQVKSLDDLKWL PGDFSSRFKLKGVRDPRYTSALNHLRFYLPEVFPSLGKVVLLDHDVVVQNDLTGLWDLDMKGKVIGAVETCTSSEGYHRLDSLVDFSNPSIFDKVDPKAC AFAFGMNIFDLNEWRKQDLTTTYHKWFQLGKIQKLWKPGSLPLGQLTFYNRTLPLDHRWHVFGLGHDFSIGRNELESASVIHYSGKLKPWLEI |
Full Sequence |
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Protein Sequence Length: 544 Download |
MWTAAGGRGS SAAAAVLRVL LIATACGLVF ALLHLPLPDG GARPAGPGEE RRGVGGGGGA 60 RLSAQQGRIR EARRLSVVTE EIEGQTDEVA AEEDERISKS PPDTKEKIWM MQDQLIMAKA 120 YLHFASPQGS VHFVRELRLR IKEIERAISH SSGGTRVPGS VLQKMKAMEL TLSKAQRIYP 180 RCCQMTAKLR AMVHNSEELV RAHQSESSFL EQVAVRTLSK GHHCLAMQLT AEYFSLDPSK 240 REFPKRESIQ LDGYYHYAIF SDNVLASAVV VNSTIAASKD PGRIILHIVT DALNYPAMMM 300 WFLRNPPTPA AIQVKSLDDL KWLPGDFSSR FKLKGVRDPR YTSALNHLRF YLPEVFPSLG 360 KVVLLDHDVV VQNDLTGLWD LDMKGKVIGA VETCTSSEGY HRLDSLVDFS NPSIFDKVDP 420 KACAFAFGMN IFDLNEWRKQ DLTTTYHKWF QLGKIQKLWK PGSLPLGQLT FYNRTLPLDH 480 RWHVFGLGHD FSIGRNELES ASVIHYSGKL KPWLEISIPK YRDYWNRYLN YDNPHLQQCN 540 IHG* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02523 | PLN02523 | 1.0e-115 | 188 | 540 | 383 | + galacturonosyltransferase | ||
PLN02742 | PLN02742 | 3.0e-130 | 113 | 542 | 457 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 5.0e-158 | 70 | 541 | 512 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 95 | 542 | 451 | + Probable galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 63 | 541 | 501 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABA94533.1 | 0 | 58 | 542 | 61 | 547 | Glycosyl transferase family 8 protein, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EAY81550.1 | 0 | 58 | 542 | 61 | 547 | hypothetical protein OsI_36716 [Oryza sativa Indica Group] |
RefSeq | NP_001068191.1 | 0 | 140 | 542 | 1 | 403 | Os11g0592300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002307628.1 | 0 | 48 | 542 | 101 | 604 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
RefSeq | XP_002451032.1 | 0 | 1 | 543 | 1 | 543 | hypothetical protein SORBIDRAFT_05g022970 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.00003 | 340 | 513 | 77 | 252 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 1g9r_A | 0.00003 | 340 | 513 | 77 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.00003 | 340 | 513 | 77 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |