y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra008696 |
Family | GT8 |
Protein Properties | Length: 524 Molecular Weight: 59637.3 Isoelectric Point: 9.0424 |
Chromosome | Chromosome/Scaffold: 10 Start: 13434520 End: 13436825 |
Description | galacturonosyltransferase 14 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 164 | 495 | 0 |
CLSLRLTDEYSSNAHARRQLPSPERLPLLSDNARHHFILSTDNILAASVVVSSAVQSSSNPEKIVFHIITDKKTYAGMHSWFALNSVDPAIVEVRGVHQF DWLTRENVPVLEALESHNGLMNYYHGSHVAGANLSETTPRRFASRLQSRSPKYISLLNHLRIYIPELFPNLDKVVFLDDDVVVQRDLAPLWDVDLGGKVN GAVETCHGEDASVMSKRLRNYFNFSHPHIAKHLNPEECAWAYGMNVFDLKAWRKTNIRETYHSWLRENLKSNLTMWKLGTLPPALIAFKGHVHVIDSSWH MLGLGYQSQTNVESIRKAAVIHYNGQSKPWLE |
Full Sequence |
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Protein Sequence Length: 524 Download |
MQLHISPSMR SITISSSKVA ARHISYRTLF HTILILAFLL PFVFILTALV TLEGANKCSS 60 IDCLGRRLGP RLLGRVDDSE RLARDFFKIL NEASTQDIPD GLKLPDSFNH LVSDTKNNHY 120 DPKTFALVLR AMMEKFERDI RQTKFAELTN KHFAASSIPK GIHCLSLRLT DEYSSNAHAR 180 RQLPSPERLP LLSDNARHHF ILSTDNILAA SVVVSSAVQS SSNPEKIVFH IITDKKTYAG 240 MHSWFALNSV DPAIVEVRGV HQFDWLTREN VPVLEALESH NGLMNYYHGS HVAGANLSET 300 TPRRFASRLQ SRSPKYISLL NHLRIYIPEL FPNLDKVVFL DDDVVVQRDL APLWDVDLGG 360 KVNGAVETCH GEDASVMSKR LRNYFNFSHP HIAKHLNPEE CAWAYGMNVF DLKAWRKTNI 420 RETYHSWLRE NLKSNLTMWK LGTLPPALIA FKGHVHVIDS SWHMLGLGYQ SQTNVESIRK 480 AAVIHYNGQS KPWLEIGFEH LRPFWTKYVN YSNDFIKNCH ILE* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02742 | PLN02742 | 2.0e-115 | 119 | 521 | 412 | + Probable galacturonosyltransferase | ||
PLN02829 | PLN02829 | 4.0e-116 | 129 | 521 | 397 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 2.0e-162 | 19 | 522 | 508 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 0 | 18 | 523 | 506 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 0 | 18 | 521 | 505 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAC01746.1 | 0 | 1 | 523 | 44 | 572 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_001118545.1 | 0 | 1 | 523 | 1 | 532 | GAUT13 (Galacturonosyltransferase 13); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | NP_186753.2 | 0 | 1 | 523 | 1 | 533 | GAUT13 (Galacturonosyltransferase 13); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | NP_197051.2 | 0 | 1 | 523 | 1 | 532 | GAUT14 (Galacturonosyltransferase 14); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002284273.1 | 0 | 1 | 523 | 1 | 533 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.000000001 | 315 | 493 | 77 | 252 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1g9r_A | 0.000000001 | 315 | 493 | 77 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.000000001 | 315 | 493 | 77 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |