y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10041389 |
Family | GT8 |
Protein Properties | Length: 629 Molecular Weight: 72229.8 Isoelectric Point: 9.4059 |
Chromosome | Chromosome/Scaffold: 280 Start: 2212378 End: 2215070 |
Description | galacturonosyltransferase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 286 | 601 | 0 |
CLSMRLTIDYYLLPPEKRKFPQSENLENPNLHHYALFSDNVLAASVVVNSTIMNAKDPSKHVFHLVADKLNFGAMNMWFLLNPPGNATIHVENVDEFKWL NSSYCPVLRQLESSAMKEYYFKANHPTSLSAGASNLKYRNPKYLSMLNHLRFYLPEVYPKLDKILFLDDDIVVQKDLTGLWSVDLHGKVNGAVETCGESF HRFDKYLNFSNPHIARNFDPNACGWAYGMNMFDLQEWKRKDITGIYHKWQTMNEDRVLWKLGTLPPGLITFYGLTHPLEKSWHVLGLGYNPSVDKGEIER AAVVHYNGNMKPWLEL |
Full Sequence |
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Protein Sequence Length: 629 Download |
MCCLFQDLDW RERLALQHVK SLFTKDVIDV ITANTADLGP FSLDAFRRSN LSASWTLVGA 60 ETSVSNSSIS EVKQKHSATI IKSETSKSKH SKLSDDEAQF IVSPEKLSRR QLREKRRERR 120 AADLVRHGDE ATIKLENAAI ERSKSVDSAV LGKYNIWRKE IDNENADSTV RLIRDQMIMA 180 RVYMSIAKMK NKLDLQQELQ TRLKESQRAI GDATADFELQ QSAAEKIKIM GQVLSKAREK 240 LYDCKMVTAN LRAMLQTADE QVRSLKKQST FLSQLAAKTI PNGIHCLSMR LTIDYYLLPP 300 EKRKFPQSEN LENPNLHHYA LFSDNVLAAS VVVNSTIMNA KDPSKHVFHL VADKLNFGAM 360 NMWFLLNPPG NATIHVENVD EFKWLNSSYC PVLRQLESSA MKEYYFKANH PTSLSAGASN 420 LKYRNPKYLS MLNHLRFYLP EVYPKLDKIL FLDDDIVVQK DLTGLWSVDL HGKVNGAVET 480 CGESFHRFDK YLNFSNPHIA RNFDPNACGW AYGMNMFDLQ EWKRKDITGI YHKWQTMNED 540 RVLWKLGTLP PGLITFYGLT HPLEKSWHVL GLGYNPSVDK GEIERAAVVH YNGNMKPWLE 600 LAMTKYRPYW TKYIKYDHPY LRNCRLTN* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02910 | PLN02910 | 0 | 28 | 627 | 609 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 167 | 624 | 458 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 165 | 624 | 465 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 0 | 167 | 624 | 481 | + galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 167 | 626 | 463 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI38820.1 | 0 | 6 | 627 | 59 | 680 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002272447.1 | 0 | 6 | 627 | 107 | 728 | PREDICTED: similar to GAUT1/LGT1 (Galacturonosyltransferase 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Vitis vinifera] |
RefSeq | XP_002302550.1 | 0 | 35 | 627 | 58 | 643 | glycosyltransferase [Populus trichocarpa] |
RefSeq | XP_002320745.1 | 0 | 6 | 627 | 67 | 686 | glycosyltransferase [Populus trichocarpa] |
RefSeq | XP_002511763.1 | 0 | 27 | 627 | 111 | 709 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.0001 | 407 | 598 | 45 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.0001 | 407 | 598 | 45 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.0001 | 407 | 598 | 45 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO842648 | 328 | 302 | 629 | 0 |
HO795725 | 456 | 171 | 626 | 0 |
GW868169 | 299 | 331 | 629 | 0 |
DT733722 | 303 | 310 | 612 | 0 |
GT042159 | 323 | 305 | 627 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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