y
Basic Information | |
---|---|
Species | Capsella rubella |
Cazyme ID | Carubv10016905m |
Family | GT8 |
Protein Properties | Length: 592 Molecular Weight: 67379.2 Isoelectric Point: 9.9153 |
Chromosome | Chromosome/Scaffold: 5 Start: 12835025 End: 12838878 |
Description | galacturonosyltransferase 1 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT8 | 334 | 581 | 0 |
CLSMRLTIDYYLLSPEKRKFPRSENLENPNLYHYALFSDNVLAASVVVNSTIMNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWL NSSYCPVLRQLESAAMREYYFKADHPTSGSSNLKYRNPKYLSMLNHLRFYLPEVYPKLNKILFLDDDIIVQKDLTPLWEVNLNGKVNGAVETCGESFHRF DKYLNFSNPHIARNFNPNACGWAYGMNMFDLKEWKKRDITGIYHKWQN |
Full Sequence |
---|
Protein Sequence Length: 592 Download |
MALKRGLSGV NRIRGSSGGS RSALVLLIFF CVFSPLVFFV GRGVYIDSSN DYSSASVKQN 60 LDWRERLAMQ SVRSLFSKEV LDVISTSTAD LGPLSLDSFK KKNLPASWRG AGVDTSLGYS 120 ENQTTPDVKS NILNEKRDST SKDGGHQKVE TPAKLHRRQL REKRREMRAN ELVQHNDDTI 180 LKLENAAIER SKSVDSAVLG KYSIWRRENE NDNSDSNIRL MRDQVIMARV YSGIAKLKNK 240 NDLLQELQAR LKDSQRVLGE STSDADLPRS AHEKLRAMGQ VLAKAKMQLY DCKLVTGKLR 300 AMLQTADEQV RSLKKQSTFL AQLAAKTIPN PIHCLSMRLT IDYYLLSPEK RKFPRSENLE 360 NPNLYHYALF SDNVLAASVV VNSTIMNAKD PSKHVFHLVT DKLNFGAMNM WFLLNPPGKA 420 TIHVENVDEF KWLNSSYCPV LRQLESAAMR EYYFKADHPT SGSSNLKYRN PKYLSMLNHL 480 RFYLPEVYPK LNKILFLDDD IIVQKDLTPL WEVNLNGKVN GAVETCGESF HRFDKYLNFS 540 NPHIARNFNP NACGWAYGMN MFDLKEWKKR DITGIYHKWQ NMVIISLTLC N* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02523 | PLN02523 | 6.0e-139 | 259 | 582 | 333 | + galacturonosyltransferase | ||
PLN02742 | PLN02742 | 7.0e-145 | 213 | 580 | 373 | + Probable galacturonosyltransferase | ||
PLN02718 | PLN02718 | 2.0e-145 | 214 | 582 | 372 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 0 | 81 | 582 | 526 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 119 | 582 | 477 | + Probable galacturonosyltransferase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK62572.1 | 0 | 1 | 582 | 1 | 582 | AT3g61130/T20K12_30 [Arabidopsis thaliana] |
EMBL | CBI38820.1 | 0 | 1 | 582 | 1 | 590 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_191672.1 | 0 | 1 | 582 | 1 | 582 | GAUT1 (GALACTURONOSYLTRANSFERASE 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002272447.1 | 0 | 1 | 582 | 49 | 638 | PREDICTED: similar to GAUT1/LGT1 (Galacturonosyltransferase 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Vitis vinifera] |
RefSeq | XP_002511763.1 | 0 | 52 | 582 | 75 | 619 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.0001 | 470 | 579 | 75 | 176 | A Chain A, Crystal Structure Of A Methyltransferase-Like Protein (Spo2022) From Silicibacter Pomeroyi Dss-3 At 1.80 A Resolution |
PDB | 1g9r_A | 0.0001 | 470 | 579 | 75 | 176 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.0001 | 470 | 579 | 75 | 176 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |