y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra004535 |
Family | GT8 |
Protein Properties | Length: 647 Molecular Weight: 75355.1 Isoelectric Point: 8.3292 |
Chromosome | Chromosome/Scaffold: 05 Start: 681772 End: 684536 |
Description | galacturonosyltransferase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 304 | 618 | 0 |
CLTMTLNLEYSLLPAPMRHFPRMENLENPDLYHYALFSDNVLAASVVVNSTVTNANDPSLHVFHIVTDKLNFGAMSMWFLLNPPKEATVHVQRFEDFSWL NSSYSPVLKQLESEAMKRFYFKTERSESAESGAESLKYRYPKYLSMLNHLRFYIPKIFPKLDKILFLDDDVVVQKDLAPLWSVDLKGKVNGAVETCGVTF HRLKAYLNFSDQHVSEKFDPEYCGWAYGMNIFDLKEWRKHNITETYHFWQNLNENRTLWKLGTLPPGLITFYNLTLPLQKKWHLLGLGYNREIDVKKIER SAVIHFNGHSKPWTE |
Full Sequence |
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Protein Sequence Length: 647 Download |
MARRVEGRNR FRDFFLCSLP VAFIMAFLYV LVSSSIFGFY APHIHSPFDN KESNFINKML 60 DALNGTATTS DSDTLSIDAI RKKKPSLSWR VEDEVESSED HMVDNFGHGT WTREGGGQVL 120 NDTPEKLYQR RMRQERREKR AKDLMKKDNH QALEKAAIQR SRSIDSVAPG NYSIWRNEYH 180 KSKNFEDLLR LMQDQIIMVR VYTSLAKMTN NLALHKELEA KLAKMEEEQE ESINIDQQQR 240 VLDTIRDMGQ LLARARKQLY DCNLVTNKLR AMLQTAEEEL VSTQTHTTFL NQLASKSIPH 300 AIHCLTMTLN LEYSLLPAPM RHFPRMENLE NPDLYHYALF SDNVLAASVV VNSTVTNAND 360 PSLHVFHIVT DKLNFGAMSM WFLLNPPKEA TVHVQRFEDF SWLNSSYSPV LKQLESEAMK 420 RFYFKTERSE SAESGAESLK YRYPKYLSML NHLRFYIPKI FPKLDKILFL DDDVVVQKDL 480 APLWSVDLKG KVNGAVETCG VTFHRLKAYL NFSDQHVSEK FDPEYCGWAY GMNIFDLKEW 540 RKHNITETYH FWQNLNENRT LWKLGTLPPG LITFYNLTLP LQKKWHLLGL GYNREIDVKK 600 IERSAVIHFN GHSKPWTELG ISKYQPYWTK YTNLEHPYIS SCRLLE* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02718 | PLN02718 | 2.0e-134 | 192 | 646 | 459 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 1.0e-153 | 238 | 642 | 407 | + galacturonosyltransferase | ||
PLN02742 | PLN02742 | 3.0e-162 | 168 | 642 | 491 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 0 | 41 | 646 | 634 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 189 | 642 | 468 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI38820.1 | 0 | 66 | 646 | 85 | 681 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_182171.1 | 0 | 95 | 646 | 7 | 528 | GAUT2; polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002302550.1 | 0 | 121 | 646 | 114 | 644 | glycosyltransferase [Populus trichocarpa] |
RefSeq | XP_002320745.1 | 0 | 55 | 646 | 84 | 687 | glycosyltransferase [Populus trichocarpa] |
RefSeq | XP_002511763.1 | 0 | 48 | 646 | 100 | 710 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.00006 | 445 | 616 | 77 | 252 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 1g9r_A | 0.00006 | 445 | 616 | 77 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.0001 | 445 | 616 | 77 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |