y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10027804m |
Family | GT8 |
Protein Properties | Length: 536 Molecular Weight: 60823.3 Isoelectric Point: 9.4153 |
Chromosome | Chromosome/Scaffold: 8 Start: 8309466 End: 8311750 |
Description | galacturonosyltransferase 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 175 | 507 | 0 |
CLALKLANEHSINAAARLQLPEAELVPTLVDNNYFHFVLASDNILAASVVAKSLVKNALRPHKIVLHIITDRKTYFPMQAWFSLHPLSPAIIEVKALHHF DWLSKGKVPVLEAMEKDQRVRSQFRGGSSVIVANNNENPVVVAAKLQALSPKYNSLMNHIRIHLPELFPSLNKVVFLDDDIVIQTDLSPLWDIDMNGKVN GAVETCRGEDKFVMSKKFKSYLNFSNPTIAKNFDPDECAWAYGMNVFDLAAWRRTNISSTYYHWLDENLKSDLSLWQLGTLPPGLIAFHGHVQTIDPFWH MLGLGYQETTSFADAESAAVVHFNGRAKPWLDI |
Full Sequence |
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Protein Sequence Length: 536 Download |
MQLHISPSLR HVTVVTGKGL REFIKVKVGS RRFSYQMMFY SLLFFTFLLR FVFVLSTVDS 60 IDGEPSPCSS LACLGKRLKP KLLGRRVDSG NVPEGMYQVL EQPLSEQELK GRTDIPQTLQ 120 DFMSEVKRSK ADAREFAQKL KEMVTLMEQR TRTAKIQEYL YRHVASSSIP KQLHCLALKL 180 ANEHSINAAA RLQLPEAELV PTLVDNNYFH FVLASDNILA ASVVAKSLVK NALRPHKIVL 240 HIITDRKTYF PMQAWFSLHP LSPAIIEVKA LHHFDWLSKG KVPVLEAMEK DQRVRSQFRG 300 GSSVIVANNN ENPVVVAAKL QALSPKYNSL MNHIRIHLPE LFPSLNKVVF LDDDIVIQTD 360 LSPLWDIDMN GKVNGAVETC RGEDKFVMSK KFKSYLNFSN PTIAKNFDPD ECAWAYGMNV 420 FDLAAWRRTN ISSTYYHWLD ENLKSDLSLW QLGTLPPGLI AFHGHVQTID PFWHMLGLGY 480 QETTSFADAE SAAVVHFNGR AKPWLDIAFP HLRPLWAKYL DSSDRFIKSC HIRAS* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 1.0e-126 | 117 | 532 | 416 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 4.0e-131 | 139 | 533 | 395 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 1.0e-158 | 105 | 532 | 431 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 0 | 1 | 535 | 535 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 0 | 1 | 535 | 535 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABP65660.1 | 0 | 1 | 535 | 1 | 533 | secondary wall-associated glycosyltransferase family 8D [Populus tremula x Populus alba] |
EMBL | CBI20502.1 | 0 | 1 | 535 | 1 | 533 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_200280.1 | 0 | 1 | 535 | 1 | 535 | GAUT12 (GALACTURONOSYLTRANSFERASE 12); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002282637.1 | 0 | 1 | 535 | 1 | 534 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319802.1 | 0 | 1 | 535 | 1 | 533 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.00001 | 323 | 504 | 74 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.00002 | 323 | 504 | 74 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.00002 | 323 | 504 | 74 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |