y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00059245m |
Family | GT8 |
Protein Properties | Length: 563 Molecular Weight: 63432.5 Isoelectric Point: 8.6672 |
Chromosome | Chromosome/Scaffold: 015076 Start: 4909 End: 10357 |
Description | galacturonosyltransferase 14 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 198 | 529 | 0 |
CLSLRLTDEYSSNAHARKQLPPPELLPLLSDNSFQHYILASDNILAASVVVSSTVRSSSVPEKVVFHVITDKKTYPGMHSWFALNSISPAIVEVKGVHQF DWLTRENVPVLEAIENHRGVRNHYHGDHGTVSSASDNPRVLASKLQARSPKYISLLNHLRIYLPELFPNLNKVVFLDDDIVVQRDLSPLWEINLEGKVNG AVETCRGDDNWVMSKRFRTYFNFSHPVTSRSLDPDECAWAYGMNIFDLAAWRKTNIRDTYHFWLKENLKSGLTLWKFGTLPPALIAFRGHVHGIDPSWHL LGLGYQEKTDIESVRRAAVIHYNGQCKPWLDI |
Full Sequence |
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Protein Sequence Length: 563 Download |
MQLRISPSMR SITISSSNGV VDSMKVRVAP QPPPPPPPPL VPGRRGGGGG WGAGWYWRAV 60 AFPAVVALGC LLPFAFILAA VPALEAGGSK CSSIDCLGRR IGPSFLGRQG GDSARLVQDL 120 YRIFDQVNNE EFPSNEKLPE SFRDFLLEMK DDHYDARTFA VRLKATMESM DKEVKRSRLA 180 EQLYKHYAAT AIPKGIHCLS LRLTDEYSSN AHARKQLPPP ELLPLLSDNS FQHYILASDN 240 ILAASVVVSS TVRSSSVPEK VVFHVITDKK TYPGMHSWFA LNSISPAIVE VKGVHQFDWL 300 TRENVPVLEA IENHRGVRNH YHGDHGTVSS ASDNPRVLAS KLQARSPKYI SLLNHLRIYL 360 PELFPNLNKV VFLDDDIVVQ RDLSPLWEIN LEGKVNGAVE TCRGDDNWVM SKRFRTYFNF 420 SHPVTSRSLD PDECAWAYGM NIFDLAAWRK TNIRDTYHFW LKENLKSGLT LWKFGTLPPA 480 LIAFRGHVHG IDPSWHLLGL GYQEKTDIES VRRAAVIHYN GQCKPWLDIA FKNLQPFWAR 540 HVNYSNDFVR NCHILEPQYD KE* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 2.0e-123 | 125 | 554 | 432 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 3.0e-134 | 146 | 554 | 411 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 4.0e-168 | 62 | 555 | 500 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 0 | 62 | 557 | 497 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 0 | 71 | 554 | 486 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF94604.1 | 0 | 1 | 562 | 1 | 577 | Glycosyl transferase family 8 protein, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EEC74744.1 | 0 | 1 | 562 | 1 | 548 | hypothetical protein OsI_10497 [Oryza sativa Indica Group] |
RefSeq | NP_001049351.1 | 0 | 1 | 556 | 1 | 569 | Os03g0211800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002284273.1 | 0 | 1 | 556 | 1 | 533 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002443426.1 | 0 | 1 | 558 | 1 | 534 | hypothetical protein SORBIDRAFT_08g019260 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.00008 | 313 | 526 | 44 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.0009 | 313 | 526 | 44 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.0009 | 313 | 526 | 44 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |