y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.012G042500.9 |
Family | GT8 |
Protein Properties | Length: 387 Molecular Weight: 43749.2 Isoelectric Point: 7.176 |
Chromosome | Chromosome/Scaffold: 12 Start: 5367923 End: 5370181 |
Description | galacturonosyltransferase 15 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 29 | 358 | 0 |
CLCLKLAEEYAVNAMARSCLPPPEHVSRLADTSFNHIVLLTDNVLAASVVISSTVENAANPEKLVFHIVTDKKTYSPMHAWFATNRLKSAVVEVKGLHQY DWSQEVNVGVKQMLEIHHLICSHYYNNLKENDLEYGGEHQNFLEALSPSCLSLMNHLRIYIPELFPELNKIVFLDDDVVVQHDISSLWTLDLNGKIVGAV VDSWCGENCCPGRKYKDYLNFSHPVIPSHLDQDRCAWLSGMNIFDLEAWRRSNITTSYHKWLKLSLNSGFTLWQPGVLPPSLLAFQGHVHPIDPLWQVAG LGYRSSSAGGQILEAAAVLHFNGPAKPWLE |
Full Sequence |
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Protein Sequence Length: 387 Download |
MEQKVQSAKK RELMYWYLAS RGVPKSLHCL CLKLAEEYAV NAMARSCLPP PEHVSRLADT 60 SFNHIVLLTD NVLAASVVIS STVENAANPE KLVFHIVTDK KTYSPMHAWF ATNRLKSAVV 120 EVKGLHQYDW SQEVNVGVKQ MLEIHHLICS HYYNNLKEND LEYGGEHQNF LEALSPSCLS 180 LMNHLRIYIP ELFPELNKIV FLDDDVVVQH DISSLWTLDL NGKIVGAVVD SWCGENCCPG 240 RKYKDYLNFS HPVIPSHLDQ DRCAWLSGMN IFDLEAWRRS NITTSYHKWL KLSLNSGFTL 300 WQPGVLPPSL LAFQGHVHPI DPLWQVAGLG YRSSSAGGQI LEAAAVLHFN GPAKPWLEIG 360 SPEVRSLWSR HVNFTNSFIQ KCRVLH* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 3.0e-110 | 2 | 384 | 386 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 4.0e-120 | 1 | 382 | 384 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 8.0e-144 | 1 | 384 | 387 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 1.0e-155 | 1 | 385 | 388 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 0 | 1 | 385 | 385 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN67083.1 | 0 | 1 | 364 | 143 | 506 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_191438.2 | 0 | 1 | 386 | 154 | 540 | GAUT15 (Galacturonosyltransferase 15); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002279893.1 | 0 | 1 | 384 | 143 | 526 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002321071.1 | 0 | 1 | 385 | 145 | 530 | glycosyltransferase [Populus trichocarpa] |
RefSeq | XP_002520380.1 | 0 | 1 | 384 | 150 | 533 | Glycosyltransferase QUASIMODO1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.00007 | 179 | 356 | 79 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.0001 | 179 | 356 | 79 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.0001 | 179 | 356 | 79 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO127225 | 288 | 98 | 385 | 0 |
CO084632 | 254 | 134 | 387 | 0 |
ES850907 | 266 | 109 | 374 | 0 |
CO120187 | 233 | 18 | 250 | 0 |
JZ151417 | 345 | 32 | 376 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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