y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.012G042500.2 |
Family | GT8 |
Protein Properties | Length: 408 Molecular Weight: 46089 Isoelectric Point: 7.6377 |
Chromosome | Chromosome/Scaffold: 12 Start: 5362013 End: 5370280 |
Description | galacturonosyltransferase 15 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 50 | 379 | 0 |
CLCLKLAEEYAVNAMARSCLPPPEHVSRLADTSFNHIVLLTDNVLAASVVISSTVENAANPEKLVFHIVTDKKTYSPMHAWFATNRLKSAVVEVKGLHQY DWSQEVNVGVKQMLEIHHLICSHYYNNLKENDLEYGGEHQNFLEALSPSCLSLMNHLRIYIPELFPELNKIVFLDDDVVVQHDISSLWTLDLNGKIVGAV VDSWCGENCCPGRKYKDYLNFSHPVIPSHLDQDRCAWLSGMNIFDLEAWRRSNITTSYHKWLKLSLNSGFTLWQPGVLPPSLLAFQGHVHPIDPLWQVAG LGYRSSSAGGQILEAAAVLHFNGPAKPWLE |
Full Sequence |
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Protein Sequence Length: 408 Download |
MTSKQQDIKA FAFKTKAMLL GMEQKVQSAK KRELMYWYLA SRGVPKSLHC LCLKLAEEYA 60 VNAMARSCLP PPEHVSRLAD TSFNHIVLLT DNVLAASVVI SSTVENAANP EKLVFHIVTD 120 KKTYSPMHAW FATNRLKSAV VEVKGLHQYD WSQEVNVGVK QMLEIHHLIC SHYYNNLKEN 180 DLEYGGEHQN FLEALSPSCL SLMNHLRIYI PELFPELNKI VFLDDDVVVQ HDISSLWTLD 240 LNGKIVGAVV DSWCGENCCP GRKYKDYLNF SHPVIPSHLD QDRCAWLSGM NIFDLEAWRR 300 SNITTSYHKW LKLSLNSGFT LWQPGVLPPS LLAFQGHVHP IDPLWQVAGL GYRSSSAGGQ 360 ILEAAAVLHF NGPAKPWLEI GSPEVRSLWS RHVNFTNSFI QKCRVLH* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 4.0e-113 | 5 | 405 | 404 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 5.0e-122 | 7 | 403 | 399 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 1.0e-148 | 7 | 405 | 402 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 4.0e-163 | 1 | 406 | 409 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 0 | 1 | 406 | 406 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN67083.1 | 0 | 1 | 385 | 122 | 506 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_191438.2 | 0 | 1 | 407 | 133 | 540 | GAUT15 (Galacturonosyltransferase 15); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002279893.1 | 0 | 1 | 405 | 122 | 526 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002321071.1 | 0 | 1 | 406 | 124 | 530 | glycosyltransferase [Populus trichocarpa] |
RefSeq | XP_002520380.1 | 0 | 1 | 405 | 129 | 533 | Glycosyltransferase QUASIMODO1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.00009 | 200 | 377 | 79 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.0001 | 200 | 377 | 79 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.0001 | 200 | 377 | 79 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO127225 | 288 | 119 | 406 | 0 |
CO084632 | 254 | 155 | 408 | 0 |
ES850907 | 266 | 130 | 395 | 0 |
CO120187 | 233 | 39 | 271 | 0 |
JZ151417 | 298 | 53 | 350 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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