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Genome Details

Selected Rep_genome_ID: HRGMv2_4564
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Gemmiger
→
Species
Gemmiger stercoravium
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_4564 3,226,346 97.95% 0.226% Malaysia Asia HRGM
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_4564_CGC2 CGCFAM_00005 Yes 5 2
HRGMv2_4564_CGC33 CGCFAM_00008 Yes 6 2
HRGMv2_4564_CGC25 CGCFAM_00035 Yes 5 2 fructan
HRGMv2_4564_CGC35 CGCFAM_00035 Yes 7 3 fructan
HRGMv2_4564_CGC39 CGCFAM_00073 Yes 13 9
HRGMv2_4564_CGC20 CGCFAM_00224 Yes 11 5
HRGMv2_4564_CGC14 CGCFAM_00226 Yes 20 7 beta-mannan
HRGMv2_4564_CGC42 CGCFAM_00302 Yes 8 1
HRGMv2_4564_CGC1 CGCFAM_00587 Yes 3 1
HRGMv2_4564_CGC11 CGCFAM_00594 Yes 5 2
HRGMv2_4564_CGC3 CGCFAM_00594 Yes 5 1
HRGMv2_4564_CGC8 CGCFAM_00970 Yes 5 4
HRGMv2_4564_CGC41 CGCFAM_01138 Yes 6 2
HRGMv2_4564_CGC38 CGCFAM_01536 Yes 3 1
HRGMv2_4564_CGC10 CGCFAM_01647 Yes 5 2
HRGMv2_4564_CGC23 CGCFAM_01653 Yes 5 1
HRGMv2_4564_CGC40 CGCFAM_02254 Yes 6 1
HRGMv2_4564_CGC19 CGCFAM_03139 Yes 12 4
HRGMv2_4564_CGC4 CGCFAM_03706 Yes 3 1
HRGMv2_4564_CGC28 CGCFAM_05711 Yes 4 1
HRGMv2_4564_CGC21 CGCFAM_07462 Yes 7 2
HRGMv2_4564_CGC9 CGCFAM_07753 Yes 12 4
HRGMv2_4564_CGC16 CGCFAM_10300 Yes 5 1
HRGMv2_4564_CGC24 CGCFAM_10650 Yes 5 1
Top CAZyme Families