Cluster: HRGMv2_4564_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4564
- CGC Family ID: CGCFAM_00005
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4564_1 | HRGMv2_4564_1_34 | 41278 | 42630 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_4564_1 | HRGMv2_4564_1_35 | 42636 | 43409 | + | GT2 |
| pfam | HRGMv2_4564_1 | HRGMv2_4564_1_36 | 43439 | 44572 | + | PS_pyruv_trans |
| STP | HRGMv2_4564_1 | HRGMv2_4564_1_37 | 44663 | 45844 | + | Fer4 | Fer4 |
| CAZyme | HRGMv2_4564_1 | HRGMv2_4564_1_38 | 45972 | 47084 | + | GT4 |
Gene ID: HRGMv2_4564_1_34
Type: TC
Location: 41278 - 42630 (+)
Type: TC
Location: 41278 - 42630 (+)
Gene ID: HRGMv2_4564_1_35
Type: CAZyme
Location: 42636 - 43409 (+)
Type: CAZyme
Location: 42636 - 43409 (+)
Gene ID: HRGMv2_4564_1_36
Type: pfam
Location: 43439 - 44572 (+)
Type: pfam
Location: 43439 - 44572 (+)
Gene ID: HRGMv2_4564_1_37
Type: STP
Location: 44663 - 45844 (+)
Type: STP
Location: 44663 - 45844 (+)
Gene ID: HRGMv2_4564_1_38
Type: CAZyme
Location: 45972 - 47084 (+)
Type: CAZyme
Location: 45972 - 47084 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.