Cluster: HRGMv2_4564_CGC38
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4564
- CGC Family ID: CGCFAM_01536
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4564_8 | HRGMv2_4564_8_28 | 31276 | 32730 | + | GH51_1 |
| pfam | HRGMv2_4564_8 | HRGMv2_4564_8_29 | 32878 | 34896 | - | FtsX |
| TC | HRGMv2_4564_8 | HRGMv2_4564_8_30 | 34883 | 35674 | - | 3.A.1.134.12 |
Gene ID: HRGMv2_4564_8_28
Type: CAZyme
Location: 31276 - 32730 (+)
Type: CAZyme
Location: 31276 - 32730 (+)
Gene ID: HRGMv2_4564_8_29
Type: pfam
Location: 32878 - 34896 (-)
Type: pfam
Location: 32878 - 34896 (-)
Gene ID: HRGMv2_4564_8_30
Type: TC
Location: 34883 - 35674 (-)
Type: TC
Location: 34883 - 35674 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.