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Cluster: HRGMv2_4564_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4564_2 HRGMv2_4564_2_240 269234 269932 - 3.A.1.4.10
TC HRGMv2_4564_2 HRGMv2_4564_2_241 269925 270725 - 3.A.1.4.10
TC HRGMv2_4564_2 HRGMv2_4564_2_242 270731 271777 - 3.A.1.4.10
TC HRGMv2_4564_2 HRGMv2_4564_2_243 271794 272684 - 3.A.1.4.10
pfam HRGMv2_4564_2 HRGMv2_4564_2_244 272808 274073 - ANF_receptor | Peripla_BP_6
CAZyme HRGMv2_4564_2 HRGMv2_4564_2_245 275135 276049 - GH113
CAZyme HRGMv2_4564_2 HRGMv2_4564_2_246 276054 278201 - GH36
NULL(UNKNOWN) HRGMv2_4564_2 HRGMv2_4564_2_247 278316 278444 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4564_2 HRGMv2_4564_2_248 278456 279091 - DUF624
CAZyme HRGMv2_4564_2 HRGMv2_4564_2_249 279123 280634 - CE20
CAZyme HRGMv2_4564_2 HRGMv2_4564_2_250 280631 281824 - GH130_1
pfam HRGMv2_4564_2 HRGMv2_4564_2_251 281811 282992 - GlcNAc_2-epim
CAZyme HRGMv2_4564_2 HRGMv2_4564_2_252 283019 284038 - GH130_2
TC HRGMv2_4564_2 HRGMv2_4564_2_253 284186 285040 - 3.A.1.1.34
TC HRGMv2_4564_2 HRGMv2_4564_2_254 285059 286066 - 3.A.1.1.28
TC HRGMv2_4564_2 HRGMv2_4564_2_255 286165 287583 - 3.A.1.1.44
TF HRGMv2_4564_2 HRGMv2_4564_2_256 287835 288821 - LacI
CAZyme HRGMv2_4564_2 HRGMv2_4564_2_257 289067 290170 + CE2
pfam HRGMv2_4564_2 HRGMv2_4564_2_258 290339 292015 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme HRGMv2_4564_2 HRGMv2_4564_2_259 292059 293417 + GH1
Gene ID: HRGMv2_4564_2_240
Type: TC
Location: 269234 - 269932 (-)
Gene ID: HRGMv2_4564_2_241
Type: TC
Location: 269925 - 270725 (-)
Gene ID: HRGMv2_4564_2_242
Type: TC
Location: 270731 - 271777 (-)
Gene ID: HRGMv2_4564_2_243
Type: TC
Location: 271794 - 272684 (-)
Gene ID: HRGMv2_4564_2_244
Type: pfam
Location: 272808 - 274073 (-)
Gene ID: HRGMv2_4564_2_245
Type: CAZyme
Location: 275135 - 276049 (-)
Gene ID: HRGMv2_4564_2_246
Type: CAZyme
Location: 276054 - 278201 (-)
Gene ID: HRGMv2_4564_2_247
Type:
Location: 278316 - 278444 (-)
Gene ID: HRGMv2_4564_2_248
Type: pfam
Location: 278456 - 279091 (-)
Gene ID: HRGMv2_4564_2_249
Type: CAZyme
Location: 279123 - 280634 (-)
Gene ID: HRGMv2_4564_2_250
Type: CAZyme
Location: 280631 - 281824 (-)
Gene ID: HRGMv2_4564_2_251
Type: pfam
Location: 281811 - 282992 (-)
Gene ID: HRGMv2_4564_2_252
Type: CAZyme
Location: 283019 - 284038 (-)
Gene ID: HRGMv2_4564_2_253
Type: TC
Location: 284186 - 285040 (-)
Gene ID: HRGMv2_4564_2_254
Type: TC
Location: 285059 - 286066 (-)
Gene ID: HRGMv2_4564_2_255
Type: TC
Location: 286165 - 287583 (-)
Gene ID: HRGMv2_4564_2_256
Type: TF
Location: 287835 - 288821 (-)
Gene ID: HRGMv2_4564_2_257
Type: CAZyme
Location: 289067 - 290170 (+)
Gene ID: HRGMv2_4564_2_258
Type: pfam
Location: 290339 - 292015 (+)
Gene ID: HRGMv2_4564_2_259
Type: CAZyme
Location: 292059 - 293417 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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