dbCAN Logo

Cluster: HRGMv2_4564_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4564_15 HRGMv2_4564_15_34 35724 36560 - 3.D.6.1.3
TC HRGMv2_4564_15 HRGMv2_4564_15_35 36579 37217 - 3.D.6.1.2
TC HRGMv2_4564_15 HRGMv2_4564_15_36 37214 37909 - 3.D.6.1.2
pfam HRGMv2_4564_15 HRGMv2_4564_15_37 37912 38484 - FMN_bind
TC HRGMv2_4564_15 HRGMv2_4564_15_38 38484 39473 - 3.D.6.1.2
TC HRGMv2_4564_15 HRGMv2_4564_15_39 39477 40811 - 3.D.6.1.2
NULL(UNKNOWN) HRGMv2_4564_15 HRGMv2_4564_15_40 41046 41186 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4564_15 HRGMv2_4564_15_41 41266 43050 - GH13_9
Gene ID: HRGMv2_4564_15_34
Type: TC
Location: 35724 - 36560 (-)
Gene ID: HRGMv2_4564_15_35
Type: TC
Location: 36579 - 37217 (-)
Gene ID: HRGMv2_4564_15_36
Type: TC
Location: 37214 - 37909 (-)
Gene ID: HRGMv2_4564_15_37
Type: pfam
Location: 37912 - 38484 (-)
Gene ID: HRGMv2_4564_15_38
Type: TC
Location: 38484 - 39473 (-)
Gene ID: HRGMv2_4564_15_39
Type: TC
Location: 39477 - 40811 (-)
Gene ID: HRGMv2_4564_15_40
Type:
Location: 41046 - 41186 (+)
Gene ID: HRGMv2_4564_15_41
Type: CAZyme
Location: 41266 - 43050 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List