Cluster: HRGMv2_4564_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4564
- CGC Family ID: CGCFAM_00970
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4564_1 | HRGMv2_4564_1_469 | 479208 | 480053 | - | 8.A.5.1.4 |
| CAZyme | HRGMv2_4564_1 | HRGMv2_4564_1_470 | 480222 | 482450 | - | GH2 |
| CAZyme | HRGMv2_4564_1 | HRGMv2_4564_1_471 | 482437 | 484950 | - | GH3 |
| CAZyme | HRGMv2_4564_1 | HRGMv2_4564_1_472 | 484964 | 486337 | - | GH43_24 |
| CAZyme | HRGMv2_4564_1 | HRGMv2_4564_1_473 | 486367 | 489066 | - | CBM67 | GH78 |
Gene ID: HRGMv2_4564_1_469
Type: TC
Location: 479208 - 480053 (-)
Type: TC
Location: 479208 - 480053 (-)
Gene ID: HRGMv2_4564_1_470
Type: CAZyme
Location: 480222 - 482450 (-)
Type: CAZyme
Location: 480222 - 482450 (-)
Gene ID: HRGMv2_4564_1_471
Type: CAZyme
Location: 482437 - 484950 (-)
Type: CAZyme
Location: 482437 - 484950 (-)
Gene ID: HRGMv2_4564_1_472
Type: CAZyme
Location: 484964 - 486337 (-)
Type: CAZyme
Location: 484964 - 486337 (-)
Gene ID: HRGMv2_4564_1_473
Type: CAZyme
Location: 486367 - 489066 (-)
Type: CAZyme
Location: 486367 - 489066 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.