Cluster: HRGMv2_4564_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4564
- CGC Family ID: CGCFAM_01647
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4564_2 | HRGMv2_4564_2_36 | 38166 | 39473 | - | GH13_20 |
| NULL(UNKNOWN) | HRGMv2_4564_2 | HRGMv2_4564_2_37 | 39555 | 40079 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4564_2 | HRGMv2_4564_2_38 | 40306 | 41136 | - | CE4 |
| TC | HRGMv2_4564_2 | HRGMv2_4564_2_39 | 41349 | 42815 | - | 2.A.38.1.1 |
| TC | HRGMv2_4564_2 | HRGMv2_4564_2_40 | 42828 | 44189 | - | 2.A.38.1.1 |
Gene ID: HRGMv2_4564_2_36
Type: CAZyme
Location: 38166 - 39473 (-)
Type: CAZyme
Location: 38166 - 39473 (-)
Gene ID: HRGMv2_4564_2_37
Type:
Location: 39555 - 40079 (-)
Type:
Location: 39555 - 40079 (-)
Gene ID: HRGMv2_4564_2_38
Type: CAZyme
Location: 40306 - 41136 (-)
Type: CAZyme
Location: 40306 - 41136 (-)
Gene ID: HRGMv2_4564_2_39
Type: TC
Location: 41349 - 42815 (-)
Type: TC
Location: 41349 - 42815 (-)
Gene ID: HRGMv2_4564_2_40
Type: TC
Location: 42828 - 44189 (-)
Type: TC
Location: 42828 - 44189 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.