Cluster: HRGMv2_4564_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4564
- CGC Family ID: CGCFAM_00587
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4564_1 | HRGMv2_4564_1_9 | 11645 | 12583 | + | GT2 |
| pfam | HRGMv2_4564_1 | HRGMv2_4564_1_10 | 12611 | 13717 | + | ATP-grasp_3 | CPSase_L_D2 | Dala_Dala_lig_C | ATP-grasp_4 |
| TC | HRGMv2_4564_1 | HRGMv2_4564_1_11 | 14105 | 14452 | + | 2.A.7.33.5 |
Gene ID: HRGMv2_4564_1_9
Type: CAZyme
Location: 11645 - 12583 (+)
Type: CAZyme
Location: 11645 - 12583 (+)
Gene ID: HRGMv2_4564_1_10
Type: pfam
Location: 12611 - 13717 (+)
Type: pfam
Location: 12611 - 13717 (+)
Gene ID: HRGMv2_4564_1_11
Type: TC
Location: 14105 - 14452 (+)
Type: TC
Location: 14105 - 14452 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.