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Cluster: HRGMv2_4564_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4564_3 HRGMv2_4564_3_121 150501 151424 + 3.A.1.1.11
TC HRGMv2_4564_3 HRGMv2_4564_3_122 151429 152295 + 3.A.1.1.11
sulfatase HRGMv2_4564_3 HRGMv2_4564_3_123 152335 154230 + S1_4
pfam HRGMv2_4564_3 HRGMv2_4564_3_124 154256 155362 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme HRGMv2_4564_3 HRGMv2_4564_3_125 155530 156516 - GH43_33
pfam HRGMv2_4564_3 HRGMv2_4564_3_126 156762 157937 - GFO_IDH_MocA | CoA_binding | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme HRGMv2_4564_3 HRGMv2_4564_3_127 157958 159124 - GH177
Gene ID: HRGMv2_4564_3_121
Type: TC
Location: 150501 - 151424 (+)
Gene ID: HRGMv2_4564_3_122
Type: TC
Location: 151429 - 152295 (+)
Gene ID: HRGMv2_4564_3_123
Type: sulfatase
Location: 152335 - 154230 (+)
Gene ID: HRGMv2_4564_3_124
Type: pfam
Location: 154256 - 155362 (+)
Gene ID: HRGMv2_4564_3_125
Type: CAZyme
Location: 155530 - 156516 (-)
Gene ID: HRGMv2_4564_3_126
Type: pfam
Location: 156762 - 157937 (-)
Gene ID: HRGMv2_4564_3_127
Type: CAZyme
Location: 157958 - 159124 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4564_3_127 vegetarian > omnivore 1.00165 0.02711
HRGMv2_4564_3_127 vegetarian > vegan 1.11280 0.00455

🧭 Explore Read Mapping of CGC

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