Cluster: HRGMv2_4564_CGC35
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate: fructan
- Genome ID: HRGMv2_4564
- CGC Family ID: CGCFAM_00035
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4564_6 | HRGMv2_4564_6_37 | 44177 | 45697 | - | GH32 |
| pfam | HRGMv2_4564_6 | HRGMv2_4564_6_38 | 45687 | 46349 | - | DUF624 |
| CAZyme | HRGMv2_4564_6 | HRGMv2_4564_6_39 | 46440 | 48170 | - | GH32 |
| CAZyme | HRGMv2_4564_6 | HRGMv2_4564_6_40 | 48251 | 50071 | - | CBM4 | CBM4 | CBM4 |
| STP | HRGMv2_4564_6 | HRGMv2_4564_6_41 | 50095 | 51819 | - | SBP_bac_1 |
| TC | HRGMv2_4564_6 | HRGMv2_4564_6_42 | 51863 | 52774 | - | 3.A.1.1.29 |
| TC | HRGMv2_4564_6 | HRGMv2_4564_6_43 | 52790 | 53752 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_4564_6_37
Type: CAZyme
Location: 44177 - 45697 (-)
Type: CAZyme
Location: 44177 - 45697 (-)
Gene ID: HRGMv2_4564_6_38
Type: pfam
Location: 45687 - 46349 (-)
Type: pfam
Location: 45687 - 46349 (-)
Gene ID: HRGMv2_4564_6_39
Type: CAZyme
Location: 46440 - 48170 (-)
Type: CAZyme
Location: 46440 - 48170 (-)
Gene ID: HRGMv2_4564_6_40
Type: CAZyme
Location: 48251 - 50071 (-)
Type: CAZyme
Location: 48251 - 50071 (-)
Gene ID: HRGMv2_4564_6_41
Type: STP
Location: 50095 - 51819 (-)
Type: STP
Location: 50095 - 51819 (-)
Gene ID: HRGMv2_4564_6_42
Type: TC
Location: 51863 - 52774 (-)
Type: TC
Location: 51863 - 52774 (-)
Gene ID: HRGMv2_4564_6_43
Type: TC
Location: 52790 - 53752 (-)
Type: TC
Location: 52790 - 53752 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.