Cluster: HRGMv2_4564_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4564
- CGC Family ID: CGCFAM_00594
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4564_1 | HRGMv2_4564_1_46 | 55925 | 57376 | + | 9.B.18.1.2 |
| NULL(UNKNOWN) | HRGMv2_4564_1 | HRGMv2_4564_1_47 | 57418 | 57765 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4564_1 | HRGMv2_4564_1_48 | 57829 | 59343 | + | GT26 |
| pfam | HRGMv2_4564_1 | HRGMv2_4564_1_49 | 59821 | 60117 | + | NAD_Gly3P_dh_N | UDPG_MGDP_dh_N |
| TC | HRGMv2_4564_1 | HRGMv2_4564_1_50 | 60769 | 61815 | + | 9.B.18.2.1 |
Gene ID: HRGMv2_4564_1_46
Type: TC
Location: 55925 - 57376 (+)
Type: TC
Location: 55925 - 57376 (+)
Gene ID: HRGMv2_4564_1_47
Type:
Location: 57418 - 57765 (+)
Type:
Location: 57418 - 57765 (+)
Gene ID: HRGMv2_4564_1_48
Type: CAZyme
Location: 57829 - 59343 (+)
Type: CAZyme
Location: 57829 - 59343 (+)
Gene ID: HRGMv2_4564_1_49
Type: pfam
Location: 59821 - 60117 (+)
Type: pfam
Location: 59821 - 60117 (+)
Gene ID: HRGMv2_4564_1_50
Type: TC
Location: 60769 - 61815 (+)
Type: TC
Location: 60769 - 61815 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.