Cluster: HRGMv2_4564_CGC41
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4564
- CGC Family ID: CGCFAM_01138
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4564_13 | HRGMv2_4564_13_36 | 40718 | 42643 | - | 3.A.2.3.3 |
| pfam | HRGMv2_4564_13 | HRGMv2_4564_13_37 | 42644 | 43729 | - | vATP-synt_AC39 |
| NULL(UNKNOWN) | HRGMv2_4564_13 | HRGMv2_4564_13_38 | 43729 | 44070 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4564_13 | HRGMv2_4564_13_39 | 44463 | 46406 | - | GH13_14 |
| peptidase | HRGMv2_4564_13 | HRGMv2_4564_13_40 | 46619 | 48169 | - | S09.UNW |
| CAZyme | HRGMv2_4564_13 | HRGMv2_4564_13_41 | 48338 | 50602 | - | GT35 |
Gene ID: HRGMv2_4564_13_36
Type: TC
Location: 40718 - 42643 (-)
Type: TC
Location: 40718 - 42643 (-)
Gene ID: HRGMv2_4564_13_37
Type: pfam
Location: 42644 - 43729 (-)
Type: pfam
Location: 42644 - 43729 (-)
Gene ID: HRGMv2_4564_13_38
Type:
Location: 43729 - 44070 (-)
Type:
Location: 43729 - 44070 (-)
Gene ID: HRGMv2_4564_13_39
Type: CAZyme
Location: 44463 - 46406 (-)
Type: CAZyme
Location: 44463 - 46406 (-)
Gene ID: HRGMv2_4564_13_40
Type: peptidase
Location: 46619 - 48169 (-)
Type: peptidase
Location: 46619 - 48169 (-)
Gene ID: HRGMv2_4564_13_41
Type: CAZyme
Location: 48338 - 50602 (-)
Type: CAZyme
Location: 48338 - 50602 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.