Cluster: HRGMv2_4564_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4564
- CGC Family ID: CGCFAM_03706
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4564_1 | HRGMv2_4564_1_78 | 90284 | 92920 | - | GH35 |
| TC | HRGMv2_4564_1 | HRGMv2_4564_1_79 | 93042 | 93866 | - | 3.A.1.1.20 |
| TC | HRGMv2_4564_1 | HRGMv2_4564_1_80 | 93877 | 94764 | - | 3.A.1.1.20 |
Gene ID: HRGMv2_4564_1_78
Type: CAZyme
Location: 90284 - 92920 (-)
Type: CAZyme
Location: 90284 - 92920 (-)
Gene ID: HRGMv2_4564_1_79
Type: TC
Location: 93042 - 93866 (-)
Type: TC
Location: 93042 - 93866 (-)
Gene ID: HRGMv2_4564_1_80
Type: TC
Location: 93877 - 94764 (-)
Type: TC
Location: 93877 - 94764 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.