dbCAN Logo

Cluster: HRGMv2_4564_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4564_3 HRGMv2_4564_3_2 2521 3573 + 2.A.20.1.7
pfam HRGMv2_4564_3 HRGMv2_4564_3_3 3680 4303 + PhoU_div
CAZyme HRGMv2_4564_3 HRGMv2_4564_3_4 4400 5722 - GH27
CAZyme HRGMv2_4564_3 HRGMv2_4564_3_5 5777 7309 - GH51_1
TC HRGMv2_4564_3 HRGMv2_4564_3_6 7468 9333 - 8.A.59.2.1
TF HRGMv2_4564_3 HRGMv2_4564_3_7 9420 10997 - HTH_AraC
STP HRGMv2_4564_3 HRGMv2_4564_3_8 11379 12821 + SBP_bac_1
TC HRGMv2_4564_3 HRGMv2_4564_3_9 13018 13938 + 3.A.1.1.11
TC HRGMv2_4564_3 HRGMv2_4564_3_10 13952 14839 + 3.A.1.1.18
pfam HRGMv2_4564_3 HRGMv2_4564_3_11 14992 15234 + NifU
CAZyme HRGMv2_4564_3 HRGMv2_4564_3_12 15256 18309 + GH38
CAZyme HRGMv2_4564_3 HRGMv2_4564_3_13 18403 21453 + GH2
Gene ID: HRGMv2_4564_3_2
Type: TC
Location: 2521 - 3573 (+)
Gene ID: HRGMv2_4564_3_3
Type: pfam
Location: 3680 - 4303 (+)
Gene ID: HRGMv2_4564_3_4
Type: CAZyme
Location: 4400 - 5722 (-)
Gene ID: HRGMv2_4564_3_5
Type: CAZyme
Location: 5777 - 7309 (-)
Gene ID: HRGMv2_4564_3_6
Type: TC
Location: 7468 - 9333 (-)
Gene ID: HRGMv2_4564_3_7
Type: TF
Location: 9420 - 10997 (-)
Gene ID: HRGMv2_4564_3_8
Type: STP
Location: 11379 - 12821 (+)
Gene ID: HRGMv2_4564_3_9
Type: TC
Location: 13018 - 13938 (+)
Gene ID: HRGMv2_4564_3_10
Type: TC
Location: 13952 - 14839 (+)
Gene ID: HRGMv2_4564_3_11
Type: pfam
Location: 14992 - 15234 (+)
Gene ID: HRGMv2_4564_3_12
Type: CAZyme
Location: 15256 - 18309 (+)
Gene ID: HRGMv2_4564_3_13
Type: CAZyme
Location: 18403 - 21453 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List