Cluster: HRGMv2_4564_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4564
- CGC Family ID: CGCFAM_00594
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4564_2 | HRGMv2_4564_2_90 | 100538 | 102088 | + | GH13_44 |
| pfam | HRGMv2_4564_2 | HRGMv2_4564_2_91 | 102227 | 103900 | - | FTHFS |
| NULL(UNKNOWN) | HRGMv2_4564_2 | HRGMv2_4564_2_92 | 104143 | 105402 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4564_2 | HRGMv2_4564_2_93 | 105484 | 106929 | - | 9.B.18.1.2 |
| CAZyme | HRGMv2_4564_2 | HRGMv2_4564_2_94 | 106989 | 107738 | - | GT26 |
Gene ID: HRGMv2_4564_2_90
Type: CAZyme
Location: 100538 - 102088 (+)
Type: CAZyme
Location: 100538 - 102088 (+)
Gene ID: HRGMv2_4564_2_91
Type: pfam
Location: 102227 - 103900 (-)
Type: pfam
Location: 102227 - 103900 (-)
Gene ID: HRGMv2_4564_2_92
Type:
Location: 104143 - 105402 (+)
Type:
Location: 104143 - 105402 (+)
Gene ID: HRGMv2_4564_2_93
Type: TC
Location: 105484 - 106929 (-)
Type: TC
Location: 105484 - 106929 (-)
Gene ID: HRGMv2_4564_2_94
Type: CAZyme
Location: 106989 - 107738 (-)
Type: CAZyme
Location: 106989 - 107738 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.