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Cluster: HRGMv2_4564_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4564_3 HRGMv2_4564_3_94 106748 108901 - GH3
CAZyme HRGMv2_4564_3 HRGMv2_4564_3_95 108936 110621 - CE17
CAZyme HRGMv2_4564_3 HRGMv2_4564_3_96 111157 112320 + GH8
CAZyme HRGMv2_4564_3 HRGMv2_4564_3_97 112418 113914 + GH51_1
TC HRGMv2_4564_3 HRGMv2_4564_3_98 113988 114680 - 9.B.28.1.3
TC HRGMv2_4564_3 HRGMv2_4564_3_99 114861 116627 + 9.B.33.1.1
TF HRGMv2_4564_3 HRGMv2_4564_3_100 116629 118251 + HTH_AraC
TC HRGMv2_4564_3 HRGMv2_4564_3_101 118537 120204 + 3.A.1.1.29
TC HRGMv2_4564_3 HRGMv2_4564_3_102 120369 121289 + 3.A.1.1.29
TC HRGMv2_4564_3 HRGMv2_4564_3_103 121303 122190 + 3.A.1.1.29
CAZyme HRGMv2_4564_3 HRGMv2_4564_3_104 122359 123921 + CBM91 | GH43_12
Gene ID: HRGMv2_4564_3_94
Type: CAZyme
Location: 106748 - 108901 (-)
Gene ID: HRGMv2_4564_3_95
Type: CAZyme
Location: 108936 - 110621 (-)
Gene ID: HRGMv2_4564_3_96
Type: CAZyme
Location: 111157 - 112320 (+)
Gene ID: HRGMv2_4564_3_97
Type: CAZyme
Location: 112418 - 113914 (+)
Gene ID: HRGMv2_4564_3_98
Type: TC
Location: 113988 - 114680 (-)
Gene ID: HRGMv2_4564_3_99
Type: TC
Location: 114861 - 116627 (+)
Gene ID: HRGMv2_4564_3_100
Type: TF
Location: 116629 - 118251 (+)
Gene ID: HRGMv2_4564_3_101
Type: TC
Location: 118537 - 120204 (+)
Gene ID: HRGMv2_4564_3_102
Type: TC
Location: 120369 - 121289 (+)
Gene ID: HRGMv2_4564_3_103
Type: TC
Location: 121303 - 122190 (+)
Gene ID: HRGMv2_4564_3_104
Type: CAZyme
Location: 122359 - 123921 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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