dbCAN HGM

Genome Details

Selected Rep_genome_ID: HRGMv2_2783
Total Genomes Found: 9

Read Mapping - JBrowse

Taxonomic Lineage

Domain

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Phylum

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Class

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Order

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Family

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Genus

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Species

Genomes Table

Genome ID	Genome Length	Completeness	Contamination	Country	Continent	Source
C54.bin_47	3,610,313	93.96%	1.68%	China(Inner Mongolia)	Asia	IMGG
CGMR058586	3,187,413	94.63%	1.01%	China	Asia	CGMR
HRGMv2_2783	3,523,704	91.72%	0%	UK	Europe	HRGM
KY021_bin.33_sub	3,215,115	93.96%	0.73%	NA	Africa	H3AfricaPhase2
MGYG000000370	2,729,121	94.63%	1.01%	Sweden	Europe	UHGG
REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Nepal_MoBio_Fiber-Hadza-Nepal_J_1_RAJ1015YZ.161	2,635,494	94.63%	0.67%	NA	Africa	Hadza
Rep_3149	3,461,447	94.6309%	1.34228%	NA	NA	WIS
ShaoY_2019_ERR3406021_bin.18	3,257,964	93.95%	1.006%	UK	Europe	ELGG
SPMP31_bin.114	2,643,041	93.12%	2.35%	Singapore	Asia	SPMP

Analysis Charts

CGCs

Gene Cluster ID	Family Name	In Labeled Family	Gene Count	CAZyme Count	Substrate
HRGMv2_2783_CGC22	CGCFAM_00010	Yes	9	2	alpha-glucan
HRGMv2_2783_CGC1	CGCFAM_00087	Yes	5	1
HRGMv2_2783_CGC23	CGCFAM_00141	Yes	8	4
HRGMv2_2783_CGC36	CGCFAM_00459	Yes	4	1
HRGMv2_2783_CGC10	CGCFAM_00501	Yes	5	1
HRGMv2_2783_CGC16	CGCFAM_00571	Yes	3	1
HRGMv2_2783_CGC21	CGCFAM_00651	Yes	5	3
HRGMv2_2783_CGC19	CGCFAM_00807	Yes	8	1
HRGMv2_2783_CGC5	CGCFAM_00866	Yes	9	3
HRGMv2_2783_CGC9	CGCFAM_01040	Yes	4	1
HRGMv2_2783_CGC24	CGCFAM_01615	Yes	5	1
HRGMv2_2783_CGC2	CGCFAM_01766	Yes	6	1
HRGMv2_2783_CGC26	CGCFAM_02424	Yes	6	1
HRGMv2_2783_CGC18	CGCFAM_02727	Yes	4	2
HRGMv2_2783_CGC27	CGCFAM_02727	Yes	3	1
HRGMv2_2783_CGC35	CGCFAM_03143	Yes	6	2
HRGMv2_2783_CGC29	CGCFAM_03281	Yes	6	1
HRGMv2_2783_CGC20	CGCFAM_03769	Yes	5	1
HRGMv2_2783_CGC11	CGCFAM_04377	Yes	8	2
HRGMv2_2783_CGC30	CGCFAM_06171	Yes	5	2
HRGMv2_2783_CGC32	CGCFAM_07327	Yes	5	1
HRGMv2_2783_CGC4	CGCFAM_08315	Yes	5	1
HRGMv2_2783_CGC3	CGCFAM_09469	Yes	6	1
HRGMv2_2783_CGC12	CGCFAM_10179	Yes	7	1
HRGMv2_2783_CGC34	CGCFAM_10180	Yes	5	3

Top CAZyme Families