Cluster: HRGMv2_2783_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2783
- CGC Family ID: CGCFAM_07327
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2783_31 | HRGMv2_2783_31_13 | 15936 | 16841 | + | 3.A.1.1.25 |
| TC | HRGMv2_2783_31 | HRGMv2_2783_31_14 | 16841 | 17692 | + | 3.A.1.1.18 |
| STP | HRGMv2_2783_31 | HRGMv2_2783_31_15 | 17860 | 19131 | + | SBP_bac_1 |
| CAZyme | HRGMv2_2783_31 | HRGMv2_2783_31_16 | 19135 | 21321 | + | GH78 |
| TC | HRGMv2_2783_31 | HRGMv2_2783_31_17 | 21299 | 23149 | + | 8.A.59.2.1 |
Gene ID: HRGMv2_2783_31_13
Type: TC
Location: 15936 - 16841 (+)
Type: TC
Location: 15936 - 16841 (+)
Gene ID: HRGMv2_2783_31_14
Type: TC
Location: 16841 - 17692 (+)
Type: TC
Location: 16841 - 17692 (+)
Gene ID: HRGMv2_2783_31_15
Type: STP
Location: 17860 - 19131 (+)
Type: STP
Location: 17860 - 19131 (+)
Gene ID: HRGMv2_2783_31_16
Type: CAZyme
Location: 19135 - 21321 (+)
Type: CAZyme
Location: 19135 - 21321 (+)
Gene ID: HRGMv2_2783_31_17
Type: TC
Location: 21299 - 23149 (+)
Type: TC
Location: 21299 - 23149 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900545925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2783_31_13 | vegetarian > vegan | 1.14615 | 0.00353 |
| HRGMv2_2783_31_14 | vegetarian > vegan | 1.13379 | 0.00353 |
| HRGMv2_2783_31_15 | vegetarian > vegan | 1.16704 | 0.00353 |
| HRGMv2_2783_31_16 | vegetarian > vegan | 1.44777 | 0.00353 |