Cluster: HRGMv2_2783_CGC35
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2783
- CGC Family ID: CGCFAM_03143
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2783_53 | HRGMv2_2783_53_2 | 439 | 1779 | - | GH1 |
| CAZyme | HRGMv2_2783_53 | HRGMv2_2783_53_3 | 1781 | 4219 | - | GH94 |
| TF | HRGMv2_2783_53 | HRGMv2_2783_53_4 | 4583 | 5590 | + | LacI |
| NULL(UNKNOWN) | HRGMv2_2783_53 | HRGMv2_2783_53_5 | 5666 | 7051 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2783_53 | HRGMv2_2783_53_6 | 7172 | 8122 | + | 3.A.1.1.11 |
| TC | HRGMv2_2783_53 | HRGMv2_2783_53_7 | 8136 | 9005 | + | 3.A.1.1.45 |
Gene ID: HRGMv2_2783_53_2
Type: CAZyme
Location: 439 - 1779 (-)
Type: CAZyme
Location: 439 - 1779 (-)
Gene ID: HRGMv2_2783_53_3
Type: CAZyme
Location: 1781 - 4219 (-)
Type: CAZyme
Location: 1781 - 4219 (-)
Gene ID: HRGMv2_2783_53_4
Type: TF
Location: 4583 - 5590 (+)
Type: TF
Location: 4583 - 5590 (+)
Gene ID: HRGMv2_2783_53_5
Type:
Location: 5666 - 7051 (+)
Type:
Location: 5666 - 7051 (+)
Gene ID: HRGMv2_2783_53_6
Type: TC
Location: 7172 - 8122 (+)
Type: TC
Location: 7172 - 8122 (+)
Gene ID: HRGMv2_2783_53_7
Type: TC
Location: 8136 - 9005 (+)
Type: TC
Location: 8136 - 9005 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900545925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.