Cluster: HRGMv2_2783_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2783
- CGC Family ID: CGCFAM_09469
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2783_1 | HRGMv2_2783_1_109 | 117332 | 118609 | + | 9.A.40.2.4 |
| pfam | HRGMv2_2783_1 | HRGMv2_2783_1_110 | 119622 | 120176 | + | DDE_Tnp_1_6 |
| pfam | HRGMv2_2783_1 | HRGMv2_2783_1_111 | 120230 | 122755 | - | Transglut_core |
| TC | HRGMv2_2783_1 | HRGMv2_2783_1_112 | 122752 | 123516 | - | 9.B.158.1.3 |
| peptidase | HRGMv2_2783_1 | HRGMv2_2783_1_113 | 123513 | 124862 | - | M17.UPW |
| CAZyme | HRGMv2_2783_1 | HRGMv2_2783_1_114 | 125012 | 126316 | - | GH29 |
Gene ID: HRGMv2_2783_1_109
Type: TC
Location: 117332 - 118609 (+)
Type: TC
Location: 117332 - 118609 (+)
Gene ID: HRGMv2_2783_1_110
Type: pfam
Location: 119622 - 120176 (+)
Type: pfam
Location: 119622 - 120176 (+)
Gene ID: HRGMv2_2783_1_111
Type: pfam
Location: 120230 - 122755 (-)
Type: pfam
Location: 120230 - 122755 (-)
Gene ID: HRGMv2_2783_1_112
Type: TC
Location: 122752 - 123516 (-)
Type: TC
Location: 122752 - 123516 (-)
Gene ID: HRGMv2_2783_1_113
Type: peptidase
Location: 123513 - 124862 (-)
Type: peptidase
Location: 123513 - 124862 (-)
Gene ID: HRGMv2_2783_1_114
Type: CAZyme
Location: 125012 - 126316 (-)
Type: CAZyme
Location: 125012 - 126316 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900545925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.