Cluster: HRGMv2_2783_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2783
- CGC Family ID: CGCFAM_00087
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2783_1 | HRGMv2_2783_1_16 | 16554 | 17357 | - | 3.A.1.26.7 |
| TC | HRGMv2_2783_1 | HRGMv2_2783_1_17 | 17351 | 18220 | - | 3.A.1.26.7 |
| TC | HRGMv2_2783_1 | HRGMv2_2783_1_18 | 18246 | 19097 | - | 3.A.1.26.7 |
| pfam | HRGMv2_2783_1 | HRGMv2_2783_1_19 | 19094 | 19963 | - | Cons_hypoth95 | Methyltransf_15 | Methyltrans_SAM |
| CAZyme | HRGMv2_2783_1 | HRGMv2_2783_1_20 | 19985 | 22468 | - | GT51 |
Gene ID: HRGMv2_2783_1_16
Type: TC
Location: 16554 - 17357 (-)
Type: TC
Location: 16554 - 17357 (-)
Gene ID: HRGMv2_2783_1_17
Type: TC
Location: 17351 - 18220 (-)
Type: TC
Location: 17351 - 18220 (-)
Gene ID: HRGMv2_2783_1_18
Type: TC
Location: 18246 - 19097 (-)
Type: TC
Location: 18246 - 19097 (-)
Gene ID: HRGMv2_2783_1_19
Type: pfam
Location: 19094 - 19963 (-)
Type: pfam
Location: 19094 - 19963 (-)
Gene ID: HRGMv2_2783_1_20
Type: CAZyme
Location: 19985 - 22468 (-)
Type: CAZyme
Location: 19985 - 22468 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900545925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.