dbCAN HGM

Cluster: HRGMv2_2783_CGC5

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2783_2	HRGMv2_2783_2_8	7442	8797	+	3.A.1.1.47
CAZyme	HRGMv2_2783_2	HRGMv2_2783_2_9	8899	10815	+	GH129
TC	HRGMv2_2783_2	HRGMv2_2783_2_10	10888	12609	+	8.A.59.2.1
TF	HRGMv2_2783_2	HRGMv2_2783_2_11	12615	14120	+	HTH_AraC \| HTH_AraC
STP	HRGMv2_2783_2	HRGMv2_2783_2_12	14117	15388	+	SBP_bac_1
TC	HRGMv2_2783_2	HRGMv2_2783_2_13	15659	16609	+	3.A.1.1.47
TC	HRGMv2_2783_2	HRGMv2_2783_2_14	16584	17429	+	3.A.1.1.47
CAZyme	HRGMv2_2783_2	HRGMv2_2783_2_15	17462	18790	+	GH29
CAZyme	HRGMv2_2783_2	HRGMv2_2783_2_16	18842	23632	+	CBM51 \| GH98

Gene ID: HRGMv2_2783_2_8
Type: TC
Location: 7442 - 8797 (+)

Gene ID: HRGMv2_2783_2_9
Type: CAZyme
Location: 8899 - 10815 (+)

Gene ID: HRGMv2_2783_2_10
Type: TC
Location: 10888 - 12609 (+)

Gene ID: HRGMv2_2783_2_11
Type: TF
Location: 12615 - 14120 (+)

Gene ID: HRGMv2_2783_2_12
Type: STP
Location: 14117 - 15388 (+)

Gene ID: HRGMv2_2783_2_13
Type: TC
Location: 15659 - 16609 (+)

Gene ID: HRGMv2_2783_2_14
Type: TC
Location: 16584 - 17429 (+)

Gene ID: HRGMv2_2783_2_15
Type: CAZyme
Location: 17462 - 18790 (+)

Gene ID: HRGMv2_2783_2_16
Type: CAZyme
Location: 18842 - 23632 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2783_2_8	vegetarian > vegan	2.35062	0.00353
HRGMv2_2783_2_9	vegetarian > vegan	1.45347	0.00353
HRGMv2_2783_2_11	vegetarian > vegan	1.31615	0.00353
HRGMv2_2783_2_12	vegetarian > vegan	1.88000	0.00353
HRGMv2_2783_2_13	vegetarian > vegan	2.63397	0.00353
HRGMv2_2783_2_14	vegetarian > vegan	1.21433	0.00353
HRGMv2_2783_2_15	vegetarian > vegan	1.15930	0.00353
HRGMv2_2783_2_16	vegetarian > vegan	2.12361	0.00353