Cluster: HRGMv2_2783_CGC36
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2783
- CGC Family ID: CGCFAM_00459
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2783_59 | HRGMv2_2783_59_2 | 3050 | 5560 | - | GH109 |
| pfam | HRGMv2_2783_59 | HRGMv2_2783_59_3 | 5647 | 7323 | - | DUF3502 |
| TC | HRGMv2_2783_59 | HRGMv2_2783_59_4 | 7435 | 8346 | - | 3.A.1.1.29 |
| TC | HRGMv2_2783_59 | HRGMv2_2783_59_5 | 8364 | 9200 | - | 3.A.1.1.29 |
Gene ID: HRGMv2_2783_59_2
Type: CAZyme
Location: 3050 - 5560 (-)
Type: CAZyme
Location: 3050 - 5560 (-)
Gene ID: HRGMv2_2783_59_3
Type: pfam
Location: 5647 - 7323 (-)
Type: pfam
Location: 5647 - 7323 (-)
Gene ID: HRGMv2_2783_59_4
Type: TC
Location: 7435 - 8346 (-)
Type: TC
Location: 7435 - 8346 (-)
Gene ID: HRGMv2_2783_59_5
Type: TC
Location: 8364 - 9200 (-)
Type: TC
Location: 8364 - 9200 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900545925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2783_59_4 | vegetarian > omnivore | 1.19518 | 0.02254 |
| HRGMv2_2783_59_5 | vegetarian > omnivore | 1.17798 | 0.02254 |