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Cluster: HRGMv2_2783_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2783_15 HRGMv2_2783_15_46 60417 62750 - GT35
CAZyme HRGMv2_2783_15 HRGMv2_2783_15_47 62856 64313 - GH77
TF HRGMv2_2783_15 HRGMv2_2783_15_48 64398 65411 - LacI
TC HRGMv2_2783_15 HRGMv2_2783_15_49 65494 66351 - 3.A.1.1.45
TC HRGMv2_2783_15 HRGMv2_2783_15_50 66351 67259 - 3.A.1.1.45
TC HRGMv2_2783_15 HRGMv2_2783_15_51 67420 68805 - 3.A.1.1.45
pfam HRGMv2_2783_15 HRGMv2_2783_15_52 69041 69667 + DUF624
TC HRGMv2_2783_15 HRGMv2_2783_15_53 69712 70425 - 9.B.169.2.2
TC HRGMv2_2783_15 HRGMv2_2783_15_54 70488 72230 - 4.C.1.1.4
Gene ID: HRGMv2_2783_15_46
Type: CAZyme
Location: 60417 - 62750 (-)
Gene ID: HRGMv2_2783_15_47
Type: CAZyme
Location: 62856 - 64313 (-)
Gene ID: HRGMv2_2783_15_48
Type: TF
Location: 64398 - 65411 (-)
Gene ID: HRGMv2_2783_15_49
Type: TC
Location: 65494 - 66351 (-)
Gene ID: HRGMv2_2783_15_50
Type: TC
Location: 66351 - 67259 (-)
Gene ID: HRGMv2_2783_15_51
Type: TC
Location: 67420 - 68805 (-)
Gene ID: HRGMv2_2783_15_52
Type: pfam
Location: 69041 - 69667 (+)
Gene ID: HRGMv2_2783_15_53
Type: TC
Location: 69712 - 70425 (-)
Gene ID: HRGMv2_2783_15_54
Type: TC
Location: 70488 - 72230 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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