Cluster: HRGMv2_2783_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2783
- CGC Family ID: CGCFAM_03769
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2783_14 | HRGMv2_2783_14_69 | 71758 | 73131 | + | CBM54 |
| NULL(UNKNOWN) | HRGMv2_2783_14 | HRGMv2_2783_14_70 | 73133 | 73660 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2783_14 | HRGMv2_2783_14_71 | 73660 | 75984 | + | 8.A.43.1.3 |
| pfam | HRGMv2_2783_14 | HRGMv2_2783_14_72 | 75989 | 76426 | + | DUF3846 |
| TC | HRGMv2_2783_14 | HRGMv2_2783_14_73 | 76428 | 77366 | + | 3.A.7.19.1 |
Gene ID: HRGMv2_2783_14_69
Type: CAZyme
Location: 71758 - 73131 (+)
Type: CAZyme
Location: 71758 - 73131 (+)
Gene ID: HRGMv2_2783_14_70
Type:
Location: 73133 - 73660 (+)
Type:
Location: 73133 - 73660 (+)
Gene ID: HRGMv2_2783_14_71
Type: TC
Location: 73660 - 75984 (+)
Type: TC
Location: 73660 - 75984 (+)
Gene ID: HRGMv2_2783_14_72
Type: pfam
Location: 75989 - 76426 (+)
Type: pfam
Location: 75989 - 76426 (+)
Gene ID: HRGMv2_2783_14_73
Type: TC
Location: 76428 - 77366 (+)
Type: TC
Location: 76428 - 77366 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900545925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.