Cluster: HRGMv2_2783_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2783
- CGC Family ID: CGCFAM_00651
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2783_15 | HRGMv2_2783_15_27 | 34005 | 36956 | + | 3.A.1.122.14 |
| CAZyme | HRGMv2_2783_15 | HRGMv2_2783_15_28 | 37044 | 38693 | - | GH13_31 |
| CAZyme | HRGMv2_2783_15 | HRGMv2_2783_15_29 | 38890 | 40176 | + | GH1 |
| CAZyme | HRGMv2_2783_15 | HRGMv2_2783_15_30 | 40173 | 42452 | + | GH36 |
| TC | HRGMv2_2783_15 | HRGMv2_2783_15_31 | 42449 | 43822 | + | 2.A.2.2.1 |
Gene ID: HRGMv2_2783_15_27
Type: TC
Location: 34005 - 36956 (+)
Type: TC
Location: 34005 - 36956 (+)
Gene ID: HRGMv2_2783_15_28
Type: CAZyme
Location: 37044 - 38693 (-)
Type: CAZyme
Location: 37044 - 38693 (-)
Gene ID: HRGMv2_2783_15_29
Type: CAZyme
Location: 38890 - 40176 (+)
Type: CAZyme
Location: 38890 - 40176 (+)
Gene ID: HRGMv2_2783_15_30
Type: CAZyme
Location: 40173 - 42452 (+)
Type: CAZyme
Location: 40173 - 42452 (+)
Gene ID: HRGMv2_2783_15_31
Type: TC
Location: 42449 - 43822 (+)
Type: TC
Location: 42449 - 43822 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900545925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.