Cluster: HRGMv2_2783_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2783
- CGC Family ID: CGCFAM_02424
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2783_18 | HRGMv2_2783_18_30 | 32433 | 34013 | + | 3.A.1.2.17 |
| TC | HRGMv2_2783_18 | HRGMv2_2783_18_31 | 34006 | 35166 | + | 3.A.1.2.12 |
| TC | HRGMv2_2783_18 | HRGMv2_2783_18_32 | 35159 | 36118 | + | 3.A.1.2.18 |
| pfam | HRGMv2_2783_18 | HRGMv2_2783_18_33 | 36128 | 37078 | + | IU_nuc_hydro |
| pfam | HRGMv2_2783_18 | HRGMv2_2783_18_34 | 37075 | 38013 | + | IU_nuc_hydro |
| CAZyme | HRGMv2_2783_18 | HRGMv2_2783_18_35 | 38086 | 39213 | - | CE9 |
Gene ID: HRGMv2_2783_18_30
Type: TC
Location: 32433 - 34013 (+)
Type: TC
Location: 32433 - 34013 (+)
Gene ID: HRGMv2_2783_18_31
Type: TC
Location: 34006 - 35166 (+)
Type: TC
Location: 34006 - 35166 (+)
Gene ID: HRGMv2_2783_18_32
Type: TC
Location: 35159 - 36118 (+)
Type: TC
Location: 35159 - 36118 (+)
Gene ID: HRGMv2_2783_18_33
Type: pfam
Location: 36128 - 37078 (+)
Type: pfam
Location: 36128 - 37078 (+)
Gene ID: HRGMv2_2783_18_34
Type: pfam
Location: 37075 - 38013 (+)
Type: pfam
Location: 37075 - 38013 (+)
Gene ID: HRGMv2_2783_18_35
Type: CAZyme
Location: 38086 - 39213 (-)
Type: CAZyme
Location: 38086 - 39213 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900545925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.