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Cluster: HRGMv2_2783_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2783_12 HRGMv2_2783_12_87 83698 84930 + 3.A.1.4.10
TC HRGMv2_2783_12 HRGMv2_2783_12_88 85142 86023 + 3.A.1.4.10
TC HRGMv2_2783_12 HRGMv2_2783_12_89 86041 87111 + 3.A.1.4.10
TC HRGMv2_2783_12 HRGMv2_2783_12_90 87104 87958 + 3.A.1.4.10
TC HRGMv2_2783_12 HRGMv2_2783_12_91 87962 88666 + 3.A.1.4.10
pfam HRGMv2_2783_12 HRGMv2_2783_12_92 88870 89802 + Acetyltransf_1 | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_7 | Acetyltransf_10
pfam HRGMv2_2783_12 HRGMv2_2783_12_93 89857 90843 - Phage_integrase
CAZyme HRGMv2_2783_12 HRGMv2_2783_12_94 91115 92329 + GT2
Gene ID: HRGMv2_2783_12_87
Type: TC
Location: 83698 - 84930 (+)
Gene ID: HRGMv2_2783_12_88
Type: TC
Location: 85142 - 86023 (+)
Gene ID: HRGMv2_2783_12_89
Type: TC
Location: 86041 - 87111 (+)
Gene ID: HRGMv2_2783_12_90
Type: TC
Location: 87104 - 87958 (+)
Gene ID: HRGMv2_2783_12_91
Type: TC
Location: 87962 - 88666 (+)
Gene ID: HRGMv2_2783_12_92
Type: pfam
Location: 88870 - 89802 (+)
Gene ID: HRGMv2_2783_12_93
Type: pfam
Location: 89857 - 90843 (-)
Gene ID: HRGMv2_2783_12_94
Type: CAZyme
Location: 91115 - 92329 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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