Cluster: HRGMv2_2783_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2783
- CGC Family ID: CGCFAM_01766
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2783_1 | HRGMv2_2783_1_38 | 38837 | 41188 | - | 3.A.7.7.1 |
| TC | HRGMv2_2783_1 | HRGMv2_2783_1_39 | 41202 | 42416 | - | 3.A.11.1.3 |
| pfam | HRGMv2_2783_1 | HRGMv2_2783_1_40 | 42464 | 43213 | - | SpoU_methylase | MRM3-like_sub_bind |
| TC | HRGMv2_2783_1 | HRGMv2_2783_1_41 | 43213 | 43860 | - | 2.A.38.4.6 |
| TC | HRGMv2_2783_1 | HRGMv2_2783_1_42 | 43878 | 45248 | - | 2.A.38.4.1 |
| CAZyme | HRGMv2_2783_1 | HRGMv2_2783_1_43 | 45390 | 46505 | + | CE4 |
Gene ID: HRGMv2_2783_1_38
Type: TC
Location: 38837 - 41188 (-)
Type: TC
Location: 38837 - 41188 (-)
Gene ID: HRGMv2_2783_1_39
Type: TC
Location: 41202 - 42416 (-)
Type: TC
Location: 41202 - 42416 (-)
Gene ID: HRGMv2_2783_1_40
Type: pfam
Location: 42464 - 43213 (-)
Type: pfam
Location: 42464 - 43213 (-)
Gene ID: HRGMv2_2783_1_41
Type: TC
Location: 43213 - 43860 (-)
Type: TC
Location: 43213 - 43860 (-)
Gene ID: HRGMv2_2783_1_42
Type: TC
Location: 43878 - 45248 (-)
Type: TC
Location: 43878 - 45248 (-)
Gene ID: HRGMv2_2783_1_43
Type: CAZyme
Location: 45390 - 46505 (+)
Type: CAZyme
Location: 45390 - 46505 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900545925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.