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Genome Details

Selected Rep_genome_ID: HRGMv2_2236
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
UBA3282
→
Species
UBA3282 sp934418125
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG466_bin.52 2,805,839 96.2% 0.57% NA Africa H3AfricaPhase2
GCA_021630465.1_ASM2163046v1_genomic 2,627,719 92.44% 1.15% NA Africa H3AfricaPhase1
HRGMv2_2236 2,957,366 98.85% 0.574% Tanzania Africa HRGM
REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-A-D_L_5_1538.208 2,680,681 91.95% 0.57% NA Africa Hadza
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_2236_CGC22 CGCFAM_00003 Yes 9 6
HRGMv2_2236_CGC33 CGCFAM_00045 Yes 6 1 alpha-glucan
HRGMv2_2236_CGC46 CGCFAM_00047 Yes 9 1
HRGMv2_2236_CGC24 CGCFAM_00049 Yes 8 5
HRGMv2_2236_CGC5 - Yes 12 6 N/A
HRGMv2_2236_CGC15 CGCFAM_00060 Yes 9 2
HRGMv2_2236_CGC44 CGCFAM_00106 Yes 8 3 alpha-glucan
HRGMv2_2236_CGC6 CGCFAM_00168 Yes 16 7
HRGMv2_2236_CGC26 CGCFAM_00171 Yes 8 2
HRGMv2_2236_CGC10 CGCFAM_00198 Yes 3 1
HRGMv2_2236_CGC42 CGCFAM_00207 Yes 4 1
HRGMv2_2236_CGC20 CGCFAM_00287 Yes 34 18
HRGMv2_2236_CGC40 CGCFAM_00307 Yes 8 1
HRGMv2_2236_CGC39 CGCFAM_00312 Yes 5 1 host glycan
HRGMv2_2236_CGC28 CGCFAM_00390 Yes 7 1
HRGMv2_2236_CGC27 CGCFAM_00491 Yes 4 2
HRGMv2_2236_CGC31 CGCFAM_00660 Yes 5 2
HRGMv2_2236_CGC3 CGCFAM_00858 Yes 5 1
HRGMv2_2236_CGC36 CGCFAM_01456 Yes 3 1
HRGMv2_2236_CGC45 CGCFAM_02560 Yes 4 1
HRGMv2_2236_CGC8 CGCFAM_02648 Yes 9 1
HRGMv2_2236_CGC16 CGCFAM_02760 Yes 6 2
HRGMv2_2236_CGC1 CGCFAM_03216 Yes 12 5
HRGMv2_2236_CGC48 CGCFAM_07599 Yes 6 1
HRGMv2_2236_CGC30 CGCFAM_08504 Yes 3 1
Top CAZyme Families