Cluster: HRGMv2_2236_CGC48
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2236
- CGC Family ID: CGCFAM_07599
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2236_41 | HRGMv2_2236_41_5 | 4920 | 5618 | - | 3.A.1.134.3 |
| CAZyme | HRGMv2_2236_41 | HRGMv2_2236_41_6 | 6059 | 7570 | + | CBM91 | GH43_12 |
| pfam | HRGMv2_2236_41 | HRGMv2_2236_41_7 | 7567 | 8304 | - | PseudoU_synth_1 | PseudoU_synth_1 |
| TC | HRGMv2_2236_41 | HRGMv2_2236_41_8 | 8371 | 9171 | - | 3.A.1.25.4 |
| TC | HRGMv2_2236_41 | HRGMv2_2236_41_9 | 9203 | 10051 | - | 3.A.1.26.7 |
| TC | HRGMv2_2236_41 | HRGMv2_2236_41_10 | 10042 | 10908 | - | 3.A.1.26.7 |
Gene ID: HRGMv2_2236_41_5
Type: TC
Location: 4920 - 5618 (-)
Type: TC
Location: 4920 - 5618 (-)
Gene ID: HRGMv2_2236_41_6
Type: CAZyme
Location: 6059 - 7570 (+)
Type: CAZyme
Location: 6059 - 7570 (+)
Gene ID: HRGMv2_2236_41_7
Type: pfam
Location: 7567 - 8304 (-)
Type: pfam
Location: 7567 - 8304 (-)
Gene ID: HRGMv2_2236_41_8
Type: TC
Location: 8371 - 9171 (-)
Type: TC
Location: 8371 - 9171 (-)
Gene ID: HRGMv2_2236_41_9
Type: TC
Location: 9203 - 10051 (-)
Type: TC
Location: 9203 - 10051 (-)
Gene ID: HRGMv2_2236_41_10
Type: TC
Location: 10042 - 10908 (-)
Type: TC
Location: 10042 - 10908 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934418125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.