dbCAN Logo

Cluster: HRGMv2_2236_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2236_28 HRGMv2_2236_28_12 7897 9516 + 8.A.7.1.1
sulfatase HRGMv2_2236_28 HRGMv2_2236_28_13 9522 10262 + S1_9
CAZyme HRGMv2_2236_28 HRGMv2_2236_28_14 10301 11434 + CE9
TC HRGMv2_2236_28 HRGMv2_2236_28_15 11428 11907 + 4.A.1.2.11
TC HRGMv2_2236_28 HRGMv2_2236_28_16 11982 13454 + 4.A.1.1.7
pfam HRGMv2_2236_28 HRGMv2_2236_28_17 13675 15234 + PLDc | PLDc_2 | PLDc_2 | PLDc_N
pfam HRGMv2_2236_28 HRGMv2_2236_28_18 15392 15835 - N_methyl
TC HRGMv2_2236_28 HRGMv2_2236_28_19 16021 16590 + 3.A.1.25.5
Gene ID: HRGMv2_2236_28_12
Type: TC
Location: 7897 - 9516 (+)
Gene ID: HRGMv2_2236_28_13
Type: sulfatase
Location: 9522 - 10262 (+)
Gene ID: HRGMv2_2236_28_14
Type: CAZyme
Location: 10301 - 11434 (+)
Gene ID: HRGMv2_2236_28_15
Type: TC
Location: 11428 - 11907 (+)
Gene ID: HRGMv2_2236_28_16
Type: TC
Location: 11982 - 13454 (+)
Gene ID: HRGMv2_2236_28_17
Type: pfam
Location: 13675 - 15234 (+)
Gene ID: HRGMv2_2236_28_18
Type: pfam
Location: 15392 - 15835 (-)
Gene ID: HRGMv2_2236_28_19
Type: TC
Location: 16021 - 16590 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2236_28_12 vegetarian > vegan 1.12037 0.00289
HRGMv2_2236_28_14 vegetarian > omnivore 1.85394 0.01810
HRGMv2_2236_28_14 vegetarian > vegan 2.07821 0.00289
HRGMv2_2236_28_15 vegetarian > omnivore 1.11582 0.01810
HRGMv2_2236_28_15 vegetarian > vegan 2.87291 0.00289

🧭 Explore Read Mapping of CGC

← Back to Cluster List